New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2615239 = | 41 (0.970) | 4 (0.100) | 4/242 | NT | 9.8% | coding (4178/4710 nt) | PP_2287 | internal core protein |
? | NC_002947 | 2615278 = | 35 (0.880) | coding (4217/4710 nt) | PP_2287 | internal core protein |
CCATGGAATCCAGCATGGTTCGGCCCATGTAGGTCAGGCTCGCCAGGAATCCCCCGTGCAGGACAGTGGACAACGTGGCCCAGTCCCGGTGGTTCGCGGCGAAGAGCATGGACTTGTTCCAGCCGTGCATGGTGAAGGCCATGAACTGGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2615391‑2615239 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggaacaAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATGGGGATGAATGAGGAGAACCGCCAGAAGTTCC > NC_002947/2615278‑2615421 CCATGGAATCCAGCATGGTTCGGCCCATGTAGGTCAGGCTCGCCAGGAATCCCCCGTGCAGGACAGTGGACAACGTGGCCCAGTCCCGGTGGTTCGCGGCGAAGAGCATGGACTTGTTCCAGCCGTGCATGGTGAAGGCCATGAACTG > 1:266568/1‑148 TGGACTTGTTCCAGCCGTGCATGGTGAAGGCCATGAACTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTG > 7:95058/1‑149 ACTTGTTCCAGCCGTGCATGGTGAAGGCCATGAACTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAA < 3:137078/138‑1 ACTTGTTCCAGCCGTGCATGGTGAAGGCCATGAACTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAA > 4:137078/1‑138 TGGTGAAGGCCATGAACTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATGGGGATGAATGAG < 8:95058/149‑1 GAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATGGGGATGAATGAGGAGAACCGCCAGAAGTTCC < 3:219581/149‑1 GAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATGGGGATGAATGAGGAGAACCGCCAGAAGTTC < 4:68692/148‑1 CCATGGAATCCAGCATGGTTCGGCCCATGTAGGTCAGGCTCGCCAGGAATCCCCCGTGCAGGACAGTGGACAACGTGGCCCAGTCCCGGTGGTTCGCGGCGAAGAGCATGGACTTGTTCCAGCCGTGCATGGTGAAGGCCATGAACTGGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2615391‑2615239 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggaacaAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATGGGGATGAATGAGGAGAACCGCCAGAAGTTCC > NC_002947/2615278‑2615421 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |