New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2615239 =	41 (0.970)	4 (0.100)	4/242	NT	9.8%	coding (4178/4710 nt)	PP_2287	internal core protein
	?	NC_002947	2615278 =	35 (0.880)					coding (4217/4710 nt)	PP_2287	internal core protein

ACTACTCCAGGTTCATGACTGCGATGCACCGTGAGTCTCGCCGTGTCATCCAGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATGGGGATGAATGAGGAGAACCGCCAGAAGTTCC  >  NC_002947/2615131‑2615421                                                                                                                                                    |                                                                                                                                                actactCCAGGTTCATGACTGCGATGCACCGTGAGTCTCGCCGTGTCATCCAGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAg                                                                                                                                                >  5:250878/1‑149 (MQ=255)     ctCCAGGTTCATGACTGCGATGCACCGTGAGTCTCGCCGTGTCATCCAGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTcc                                                                                                                                             <  5:108136/148‑1 (MQ=255)     cagcatggttcggcccatgtaggtcaggctcgccaggaatcccccgtgcaggacagtggacaacgtggcccagtcccggtggttcgcggcgaagagcatggactTGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCa                                                                                                                                            >  7:95058‑M1/105‑149 (MQ=255)        cAGGTTCATGACTGCGATGCACCGTGAGTCTCGCCGTGTCATCCAGGAGAACGACCTTAGCCCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATg                                                                                                                                          <  7:141893/148‑1 (MQ=255)             ttcggcccatgtaggtcaggctcgccaggaatcccccgtgcaggacagtggacaacgtggcccagtcccggtggttcgcggcgaagagcatggactTGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGt                                                                                                                                               >  4:137078‑M1/97‑138 (MQ=255)             ttcggcccatgtaggtcaggctcgccaggaatcccccgtgcaggacagtggacaacgtggcccagtcccggtggttcgcggcgaagagcatggactTGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGt                                                                                                                                               <  3:137078‑M1/42‑1 (MQ=255)               aTGACTGCGATGCACCGTGAGTCTCGCCGTGTCATCCAGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTcgc                                                                                                                                  >  3:92444/1‑149 (MQ=255)               aTGACTGCGATGCACCGTGAGTCTCGCCGTGTCATCCAGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTcgc                                                                                                                                  >  3:88581/1‑149 (MQ=255)                 gACTGCGATGCACCGTGAGTCTCGCCGTGTCATCCAGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTcgccg                                                                                                                                >  4:79585/1‑149 (MQ=255)                  aCTGCGATGCACCGTGAGTCTCGCCGTGTCATCCAGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTcgccgc                                                                                                                               <  6:250878/149‑1 (MQ=255)                         tGCACCGTGAGTCTCGCCGTGTCATCCAGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAacccc                                                                                                                        >  7:112397/1‑147 (MQ=255)                          gCACCGTGAGTCTCGCCGTGTCATCAAGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACAATGCACGGCTGGAACAAGTCCATGCTCTTCGTCGCGAaccacc                                                                                                                       >  6:64312/1‑149 (MQ=255)                             ccGTGAGTCTCGCCGTGTCATCCAGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCgg                                                                                                                     >  1:248111/1‑148 (MQ=255)                                  aGTCTCGCCGTGTCATCCAGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTgg                                                                                                               <  5:91241/149‑1 (MQ=255)                                    tctcGCCGTGTCAACCAGCAGAACGCCCTTAGCTCCATGATTCCCCTCATGGGGACCACACTAGGAAAAGCCAGGTACCAGTACATGGCCTACCCCATGCACGGCTGGAACAGGACCATGCTCTACGCCCCGAACCACCGGCACGGGGc                                                                                                             >  2:190037/1‑149 (MQ=255)                                        gCCGTGTCATCCAGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATTTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGcc                                                                                                            <  4:92444/146‑1 (MQ=255)                                        gCCGTGTCATCCAGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGcc                                                                                                            <  4:88581/146‑1 (MQ=255)                                               cATCCAGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCa                                                                                                  >  2:266568/1‑149 (MQ=255)                                                 tCCAGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTAGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACt                                                                                                >  3:68692/1‑149 (MQ=255)                                                   cAGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTg                                                                                               <  4:241791/148‑1 (MQ=255)                                                    aGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTc                                                                                             >  5:258839/1‑149 (MQ=255)                                                             aCCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACggg                                                                                    <  2:248111/149‑1 (MQ=255)                                                              ccTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACgggg                                                                                   >  6:161071/1‑149 (MQ=255)                                                               cTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCCCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACggggg                                                                                  <  1:195254/149‑1 (MQ=255)                                                                   gCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTc                                                                              <  5:161071/149‑1 (MQ=255)                                                                           aTTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAg                                                                      >  3:162878/1‑149 (MQ=255)                                                                             tCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGc                                                                     <  4:162878/148‑1 (MQ=255)                                                                                 cTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGAc                                                                <  3:79585/149‑1 (MQ=255)                                                                                      ggggACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACa                                                           >  3:170145/1‑149 (MQ=255)                                                                                            cacaCTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGcc                                                     >  5:41079/1‑149 (MQ=255)                                                                                               acTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGaa                                                  <  1:134768/149‑1 (MQ=255)                                                                                                       tggacttgttccagccgtgcatggtgaaggccatgaactggaacaAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTg                                          >  7:95058‑M2/46‑149 (MQ=255)                                                                                                          acttgttccagccgtgcatggtgaaggccatgaactggaacaAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGaa                                                  >  4:137078‑M2/43‑138 (MQ=255)                                                                                                          acttgttccagccgtgcatggtgaaggccatgaactggaacaAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGaa                                                  <  3:137078‑M2/96‑1 (MQ=255)                                                                                                                  CAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATgg                                >  1:266568‑M1/1‑148 (MQ=255)                                                                                                                     ttCATGGCCTTCACCAAGCACCGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCCCTGTCCTGCACGCGGGATTCCTGGCGAGCCTGACCTACATGGCCCGAACCAGGCTGGATTCCATGGGGat                            >  5:208214/1‑149 (MQ=255)                                                                                                                         tGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGaa                                                  <  1:144984/123‑1 (MQ=255)                                                                                                                         tGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGaa                                                  >  2:144984/1‑123 (MQ=255)                                                                                                                            tggtgaaggccatgaactggaacaAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATGGGGATGAATgag                     <  8:95058‑M2/125‑1 (MQ=255)                                                                                                                            ccTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATGGGGATGAATgag                     <  8:112397/149‑1 (MQ=255)                                                                                                                                   cATGCACGGCTGGTACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATGGGGATGAATGAGGAGAAcc              <  4:170145/149‑1 (MQ=255)                                                                                                                                   cATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATGGGGatgaat                        <  6:140618/139‑1 (MQ=255)                                                                                                                                   cATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATGGGGatgaat                        >  5:140618/1‑139 (MQ=255)                                                                                                                                    aTGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATGGGGATGAATGAGGAGAACCg             <  6:258839/149‑1 (MQ=255)                                                                                                                                     tGCACGGCTGGAACATGTCCTTGCTCTTCGCCGCGAACCTCCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGAGCTACATGGGCCGAACCATGCTGGATTCCATGGGGATGAATGAGGAGAACCGc            <  6:208214/149‑1 (MQ=255)                                                                                                                                       cACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATGGGGATGAATGAGGAGAACCGCCa          <  6:151523/149‑1 (MQ=255)                                                                                                                                         cGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATGGGGATGAATGAGGAGAACCGCCAGa        <  6:41079/149‑1 (MQ=255)                                                                                                                                               gaacaAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATGGGGATGAATGAGGAGAACCGCCAGAAGTTcc  <  3:219581‑M2/144‑1 (MQ=255)                                                                                                                                               gaacaAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATGGGGATGAATGAGGAGAACCGCCAGAAGTTc   <  4:68692‑M2/143‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                ACTACTCCAGGTTCATGACTGCGATGCACCGTGAGTCTCGCCGTGTCATCCAGGAGAACGACCTTAGCTCCATGATTCCACTCATGGGGACCACACTAGGAAAAGCCATGTTCCAGTTCATGGCCTTCACCATGCACGGCTGGAACAAGTCCATGCTCTTCGCCGCGAACCACCGGGACTGGGCCACGTTGTCCACTGTCCTGCACGGGGGATTCCTGGCGAGCCTGACCTACATGGGCCGAACCATGCTGGATTCCATGGGGATGAATGAGGAGAACCGCCAGAAGTTCC  >  NC_002947/2615131‑2615421

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.