| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2673825 = | 40 (0.950) | 4 (0.100) | 3/244 | NT | 9.2% | intergenic (‑15/+7) | PP_5519/PP_2342 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 2673861 = | 41 (1.030) | coding (166/195 nt) | PP_2342 | hypothetical protein | |||||
ATTCTCCGCACCCAGGAGAGGCGGGACGAGCAGACGAATCGAATCTGTACCCGCAGCTATCACCGCCAAGGTCTCGTTCTTCATGGCACGCAAGTCCAGCCTGCAGCTGTACCTGGCCGGCAGTGAACCGCTCAAGGCCTGACCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2673973‑2673825‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggccaGGTACAGCTGCAGGCTGGACTTGCGTGCCATGAAGAACGAGACCTTGGCGGTGATAGCTGCGGGTACAGATTCGATTCGTCTGCTCGTCCCGCCTCTCCTGGGTGCGGAGAATAATGCTGCAGTGGTACATTTCCTGATCGTCAAAAG > NC_002947/2673861‑2674008 ATTCTCCGCACCCAGGAGAGGCGGGACGAGCAGACGAATCGAATCTGTACCCGCAGCTATCACCGCCAAGGTCTCGTTCTTCATGGCACGCAAGTCCAGCCTGCAGCTGTACCTGGCCGGCAGTGAACCGCTCAAGGCCTGACCGGCC < 5:129091/148‑1 TTCTCCGCACCCAGGAGAGGCGTGACGAGCAGACGAATCGAATCTGTACCCGCAGCTATCACCGCCAAGGTCTCGTTCTTCATGGCACGCAAGTCCAGCCTGCAGCTGTACCTGGCCGGCAGTGAACCGCTCAAGGCCTGACCGGCCA < 3:6918/148‑1 ACCTGGCCGGCAGTGAACCGCTCAAGGCCTGACCGGCCAGGTACAGCTGCAGGCTGGACTTGCGTGCCATGAAGAACGAGACCTTGGCGGTGATAGCTGCGGGTACAGATTCGATTCGTCTGCTCGTCCCGCCTCTCCTGGGTGCG > 3:88647/1‑146 CTGGCCGGCAGTGAACCGCTCAAGGCCTGACCGGCCAGGTACAGCTGCAGGCTGGACTTGCGTGCCATGAAGAACGAGACCTTGGCGGTGATAGCTGCGGGTACAGATTCGATTCGTCTGCTCGTCCCGCCTCTCCTGGGTGCGGAGAA > 3:63887/1‑149 CTGGCCGGCAGTGAACCGCTCAAGGCCTGACCGGCCAGGTACAGCTGCAGGCTGGACTTGCGTGCCATGAAGAACGAGACCTTGGCGGTGATAGCTGCGGGTACAGATTCGATTCGTCTGCTCGTCCCGCCTCTCCTGGGTGCGGAGAA > 7:242009/1‑149 CTGGCCGGCAGTGAACCGCTCAAGGCCTGACCGGCCAGGTACAGCTGCAGGCTGGACTTGCGTGCCATGAAGAACGAGACCTTGGCGGTGATAGCTGCGGGTACAGATTCGATTCGTCTGCTCGTCCCGCCTCTCCTGGGTGCGGAGAA < 8:242009/149‑1 CCGGCCAGGTACAGCTGCAGGCTGGACTTGCGTGCCATGAAGAACGAGACCTTGGCGGTGATAGCTGCGGGTACAGATTCGATTCGTCTGCTCGTCCCGCCTCTCCTGGGTGCGGAGAATAATGCTGCAGTGGTACATTTCCTGATCGT < 4:188124/149‑1 CCGGCCAGGTACAGCTGCAGGCTGGACTTGCGTGCCATGAAGAACGAGACCTTGGCGGTGATAGCTGCGGGTACAGATTCGATTCGTCTGCTCGTCCCGCCTCTCCTGGGTGCGGAGAATAATGCTGCAGTGGTACATTTCCTGATC < 6:129091/147‑1 AGGTACAGCTGCAGGCTGGACTTGCGTGCCATGAAGAACGAGACCTTGGCGGTGATAGCTGCGGGTACAGATTCGATTCGTCTGCTCGTCCCGCCTCTCCTGGGTGCGGAGAATAATGCTGCAGTGGTACATTTCCTGATCGTCAAAAG < 4:88647/149‑1 ATTCTCCGCACCCAGGAGAGGCGGGACGAGCAGACGAATCGAATCTGTACCCGCAGCTATCACCGCCAAGGTCTCGTTCTTCATGGCACGCAAGTCCAGCCTGCAGCTGTACCTGGCCGGCAGTGAACCGCTCAAGGCCTGACCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2673973‑2673825‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggccaGGTACAGCTGCAGGCTGGACTTGCGTGCCATGAAGAACGAGACCTTGGCGGTGATAGCTGCGGGTACAGATTCGATTCGTCTGCTCGTCCCGCCTCTCCTGGGTGCGGAGAATAATGCTGCAGTGGTACATTTCCTGATCGTCAAAAG > NC_002947/2673861‑2674008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |