| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2872578 = | 42 (0.990) | 5 (0.120) | 4/248 | NT | 10.8% | coding (497/1164 nt) | PP_2525 | hypothetical protein |
| ? | NC_002947 | 2872648 = | 42 (1.040) | coding (427/1164 nt) | PP_2525 | hypothetical protein | |||||
GCTGGTCGAGCGCAAGAATGCCCTGGTGCGGGCCCGCGAGGGCAACCGCTGGGCAGTGCTCGATCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2872646‑2872578‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaAGGAAGAGGGGCGATAGGCGCCAGCGCCCCAGATGGCCTCGCACTTTATTTCAGGGTCGAGCATGAACGCGCTCGGATACGGCAGGGGAATTGGCAGGCCGAGGGTGATGGCAAAACCGAGGTCTTCGGTG > NC_002947/2872648‑2872778 GCTGGTCGAGCGCAAGAATGCCCTGGTGCGGGCCCGCGAGGGCAACCGCTGGGCAGTGCTCGATCAGCAAGGAAGAGGGGCGATAGGCGCCAGCGCCCCAGATGGCCTCGCACTTTATTTCAGG < 1:258948/124‑1GCTGGTCGAGCGCAAGAATGCCCTGGTGCGGGCCCGCGAGGGCAACCGCTGGGCAGTGCTCGATCAGCAAGGAAGAGGGGCGATAGGCGCCAGCGCCCCAGATGGCCTCGCACTTTATTTCAGG > 2:258948/1‑124GCTGGTCGAGCGCAAGAATGCCCTGGTGCGGGCCCGCGAGGGCAACCGCTGGGCAGTGCTCGATCAGCAAGGAAGAGGGGCGATAGGCGCCAGCGCCCCAGATGGCCTCG > 1:201008/1‑110 TGGTCGAGCGCAAGAATGCCCTGGTGCGGGCCCGCGAGGGCAACCGCTGGGCAGTGCTCGATCAGCAAGGAAGAGGGGCGATAGGCGCCAGCGCCCCAGATGGCCTCGCACTTTATTTCAGGGTCGAGCATGAACGCGCTCGGATACGG > 8:46494/1‑149 GGCAGTGCTCGATCAGCAAGGAAGAGGGGCGATAGGCGCCAGCGCCCCAGATGGCCTCGCACTTTATTTCAGGGTCGAGCATGAACGCGCTCGGATACGGCAGGGGAATTGGCAGGCCGAGGGTGATGGCAAAACCGAGGTCTTCGGTG < 7:46494/149‑1 CAAGGAAGAGGGGCGATAGGCGCCAGCGCCCCAGATGGCCTCGCACTTTATTTCAGGGTCGAGCATGAACGCGCTCGGATACGGCAGGGGAATTGGCAGGCCGAGGGTGA < 3:28990/110‑1 CAAGGAAGAGGGGCGATAGGCGCCAGCGCCCCAGATGGCCTCGCACTTTATTTCAGGGTCGAGCATGAACGCGCTCGGATACGGCAGGGGAATTGGCAGGCCGAGGGTGA > 4:28990/1‑110 GCTGGTCGAGCGCAAGAATGCCCTGGTGCGGGCCCGCGAGGGCAACCGCTGGGCAGTGCTCGATCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2872646‑2872578‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaAGGAAGAGGGGCGATAGGCGCCAGCGCCCCAGATGGCCTCGCACTTTATTTCAGGGTCGAGCATGAACGCGCTCGGATACGGCAGGGGAATTGGCAGGCCGAGGGTGATGGCAAAACCGAGGTCTTCGGTG > NC_002947/2872648‑2872778 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |