| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2875791 = | 34 (0.810) | 3 (0.070) | 3/250 | NT | 9.0% | coding (92/1278 nt) | PP_2528 | O‑acetylhomoserine (thiol)‑lyase |
| ? | NC_002947 | 2875829 = | 28 (0.680) | coding (54/1278 nt) | PP_2528 | O‑acetylhomoserine (thiol)‑lyase | |||||
ATGCCCACTCGCCGCCGCATGCTCGAACGCTTCCACCCACGCTCAAGGAACGATTGCATGAAGCTGGAAACGCTTGCCATCCATGCGGGCTTCAGCCCCGACCCGACCACCAAGGCGGTGGCCGTACCGATCTACCAGACCACCTCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2875939‑2875791‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttGGTGGTCGGGTCGGGGCTGAAGCCCGCATGGATGGCAAGCGTTTCCAGCTTCATGCAATCGTTCCTTGAGCGTGGGTGGAAGCGTTCGAGCATGCGGCGGCGAGTGGGCATGGGTCAAGGAGGATCATTCTGGCGGTCCC > NC_002947/2875829‑2875968 ATGCCCACTCGCCGCCGCATGCTCGAACGCTTCCACCCACGCTCAAGGAACGATTGCATGAAGCTGGAAACGCTTGCCATCCATGCGGGCTTCAGCCCCGACCCGACCACCAAGGCGGTGGCCGTACCGATCTACCAGACCACCTCCTT > 8:173992/1‑149 CCGACCACCAAGGCGGTGGCCGTACCGATCTACCAGACCACCTCCTTGGTGGTCGGGTCGGGGCTGAAGCCCGCATGGATGGCAAGCGTTTCCAGCTTCATGCAATCGTTCCTTGAGCGTGGGTGGAAGCGTTCGAGCATGCGGCGGC > 1:42329/1‑148 ACCAAGGCGGTGGCCGTACCGATCTACCAGACCACCTCCTTGGTGGTCGGGTCGGGGCTGAAGCCCGCATGGATGGCAAGCGTTTCCAGCTTCATGCAATCGTTCCTTGAGCGTGGGTGGAAGCGTTCGAGCATGCGGCGGCGAGTGGG < 2:42329/149‑1 ACCAAGGCGGTGGCCGTACCGATCTACCAGACCACCTCCTTGGTGGTCGGGTCGGGGCTGAAGCCCGCATGGATGGCAAGCGTTTCCAGCTTCATGCAATCGTTCCTTGAGCGTGGGTGGAAGCGTTCGAGCATGCGGCGGCGAGTGGG > 2:9160/1‑149 CACCTCCTTGGTGGTCGGGTCGGGGCTGAAGCCCGCATGGATGGCAAGCGTTTCCAGCTTCATGCAATCGTTCCTTGAGCGTGGGTGGAAGCGTTCGAGCATGCGGCGGCGAGTGGGCATGGGTCAAGGAGGATCATTCTGGCGGTCCC < 1:9160/149‑1 ATGCCCACTCGCCGCCGCATGCTCGAACGCTTCCACCCACGCTCAAGGAACGATTGCATGAAGCTGGAAACGCTTGCCATCCATGCGGGCTTCAGCCCCGACCCGACCACCAAGGCGGTGGCCGTACCGATCTACCAGACCACCTCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2875939‑2875791‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttGGTGGTCGGGTCGGGGCTGAAGCCCGCATGGATGGCAAGCGTTTCCAGCTTCATGCAATCGTTCCTTGAGCGTGGGTGGAAGCGTTCGAGCATGCGGCGGCGAGTGGGCATGGGTCAAGGAGGATCATTCTGGCGGTCCC > NC_002947/2875829‑2875968 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |