New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2972458 | 36 (0.850) | 3 (0.070) | 3/250 | NT | 8.3% | coding (1416/1713 nt) | PP_2600 | hypothetical protein |
? | NC_002947 | = 2972519 | 31 (0.760) | coding (1355/1713 nt) | PP_2600 | hypothetical protein |
GTTGCCCCGCCTCATCCAGTACACGGGCATTGCCGTCGGTGCGCAACCCGGCAAAGGTGCCAAAACAGCCGGGCTTTACTTTCACCGCATAGAACGGCCCGTGCTCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2972307‑2972458 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccATGCCCGTAACGGCCAGGACCCGGCGTTTGGCCGCGGTTCCACGCCGTTCAACCGCAAGCAGGGTGACCCACAGCACAAGGGCCCTAACCCTTGCGTGGCGCCCATCGAGCACGGGCCGTTCTATGCGGTGAAAGTAAAGCCCGG < NC_002947/2972519‑2972375 GTTGCCCCGCCTCATCCAGTACACGGGCATTGCCGTCGGTGCGCAACCCCGCAAAGCTGCCAAAACAGCCGGGCTTTACTTTCACCGCATAGAACGGCCCGTGCTCGATGGGCGCCACGCAAGGCTTAGGGCCCTTCTGCTGTGGGTCA > 1:240170/1‑149 GGCAAAGGTGCCAAAACAGCCGGGCTTTACTTTCACCGCATAGAACGGCCCGTGCTCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCATGCCCGTAACGGCCAGGACCCGGCGTTTGGCCGCGGTTCCACGCC > 4:28835/1‑149 GCTTTACTTTCACCGCATAGAACGGCCCGTGCTCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCATGCCCGTAACGGCCAGGACCCGGCGTTTGGCCGCGGTTCCACGCCGTTCAACCGCAAGCAGGGTGACC < 7:18820/149‑1 TACTTTCACCGCATAGAACGGCCCGTGCTCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCATGCCCGTAACGGCCAGGACCCGGCGTTTGGCCGCGGTTCCACGCCGTTCAACCGCAAGCAGGGTGACCCA < 3:28835/147‑1 ACCCATGCCCGTAACGGCCAGGACCCGGCGTTTGGCCGCGGTTCCACGCCGTTCAACCGCAAGCAGGGTGACCCACAGCACAAGGGCCCTAACCCTTGCGTGGCGCCCATCGAGCACGGGCCGTTCTATGCGGTGAAAGTAAAGCCCGG > 7:153908/1‑149 GTTGCCCCGCCTCATCCAGTACACGGGCATTGCCGTCGGTGCGCAACCCGGCAAAGGTGCCAAAACAGCCGGGCTTTACTTTCACCGCATAGAACGGCCCGTGCTCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2972307‑2972458 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccATGCCCGTAACGGCCAGGACCCGGCGTTTGGCCGCGGTTCCACGCCGTTCAACCGCAAGCAGGGTGACCCACAGCACAAGGGCCCTAACCCTTGCGTGGCGCCCATCGAGCACGGGCCGTTCTATGCGGTGAAAGTAAAGCCCGG < NC_002947/2972519‑2972375 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |