New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2972458	36 (0.850)	3 (0.070)	3/250	NT	8.3%	coding (1416/1713 nt)	PP_2600	hypothetical protein
	?	NC_002947	= 2972519	31 (0.760)					coding (1355/1713 nt)	PP_2600	hypothetical protein

CCGGGCTTTACTTTCACCGCATAGAACGGCCCGTGCTCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTGGGCGAGCTGCTCGAGCGTAGCGCCGCGTTTCAGGTAGCCGTTGCGCACATGCGGCCCTACCGGCAGCGGTGCCGGGCGG  >  NC_002947/2972375‑2972656                                                                                                                                                 |                                                                                                                                          ccGGGCTTTACTTTCACCGCATAGAACGGCCCGTGCTCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATgggt                                                                                                                                       >  7:153908‑M2/1‑145 (MQ=255)    ggCTTTACTTTCACCGCATAGAACGGCCCGTGCTCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTAtt                                                                                                                                    <  3:94616/149‑1 (MQ=255)       tttACTTTCACCGCATAGAACGGCCCGTGCTCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGaa                                                                                                                                 <  3:162319/149‑1 (MQ=255)            tttCACCGCATAGAACGGCCCGCGCTCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAg                                                                                                                            >  4:242269/1‑149 (MQ=255)               cACCGCATAGAACGGCCCGTGCTCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTg                                                                                                                          <  6:266590/148‑1 (MQ=255)                 ccGCATAGAACGGCCCGTGCTCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGAcc                                                                                                                       <  1:99957/149‑1 (MQ=255)                 ccGCATAGAACGGCCCGTGCTCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGAcc                                                                                                                       >  3:249786/1‑149 (MQ=255)                  cGCATAGAACGGCCCGTGCTCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCg                                                                                                                      >  5:227557/1‑149 (MQ=255)                              cccGTGCTCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGcc                                                                                                          >  1:138150/1‑149 (MQ=255)                              cccGTGCTCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGcc                                                                                                          >  2:244755/1‑149 (MQ=255)                               ccGTGCTCGATGGGCGCCACGCAAGGGTTAGGGGCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGTACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGccc                                                                                                         <  2:240170/149‑1 (MQ=255)                                     tCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACgg                                                                                                   >  5:42688/1‑149 (MQ=255)                                        aTGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTc                                                                                                <  2:159806/149‑1 (MQ=255)                                           ggCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAAt                                                                                             <  1:57637/149‑1 (MQ=255)                                                   gCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAgg                                                                                     <  6:40314/149‑1 (MQ=255)                                                        ggTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTgg                                                                                <  3:242269/149‑1 (MQ=255)                                                        ggTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTGGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTgg                                                                                <  8:115067/149‑1 (MQ=255)                                                             gggCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTGGGCGAg                                                                           >  1:197289/1‑149 (MQ=255)                                                                      tgCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTGGGCGAGCTGCTCGa                                                                   <  1:244755/148‑1 (MQ=255)                                                                      tgCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTGGGCGAGCTGCTCGAg                                                                  >  4:134276/1‑149 (MQ=255)                                                                        cTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTGGGCGAGCTGCTCGAGc                                                                 <  6:42688/148‑1 (MQ=255)                                                                         tgtgGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTGGGCGAGCTGCTCGAGCg                                                                >  1:163814/1‑148 (MQ=255)                                                                           tgGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATgggtgacccacagcacaagggccctaacccttgcgtggcgcccatcgagcacgggccgttctatgcggtgaaagta                                                               <  3:28835‑M2/147‑77 (MQ=255)                                                                             ggTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATgggtgacccacagcacaagggccctaacccttgcgtggcgcccatcgagcacgggccgttctatgcggtgaaagtaaagc                                                           <  7:18820‑M2/149‑81 (MQ=255)                                                                                   ccTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGAcc                                                                                                                       <  3:257183/83‑1 (MQ=255)                                                                                   ccTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGAcc                                                                                                                       >  4:257183/1‑83 (MQ=255)                                                                                             gTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCa                                                                                       >  1:193124/1‑105 (MQ=255)                                                                                             gTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCa                                                                                       <  2:193124/105‑1 (MQ=255)                                                                                                gAACGGCGTGGAACCGCGGCCAAACGCCGGATCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTGGGCGAGCTGCTCGAGCGTAGCGCCGCGTTTCAGGTAGCCGt                                        >  1:160855/1‑149 (MQ=255)                                                                                                gAACGGCGTGGAACAGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTGGGCGAGCTGCTCGAGCGTAGCGCCGCGTTTCAGGTAGCCg                                         <  6:227557/148‑1 (MQ=255)                                                                                                    ggCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATgggtgacccacagcacaagggccctaacccttgcgtggcgcccatcgagcacgggccgttctatgcggtgaaagtaaagcccggctgttttggcacctttgcc                                    >  4:28835‑M2/1‑46 (MQ=255)                                                                                                              cgcgGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTGGGCGAGCTGCTCGAGCATAGCGCCGCGTTTCAGGTAGCCGTTGCGCACATGCGGc                          >  6:192862/1‑149 (MQ=255)                                                                                                                     aaaCGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTGGGCGAGCTGCTCGAGCATAGCGCCGCGTTTCAGGTAGCCGTTGCGCACATGCGGCCCTACCg                   >  3:154831/1‑149 (MQ=255)                                                                                                                         gCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTGGGCGAGCTGCTCGAGCGTAGCGCCGCGTTTCAGGTAGCCGTTGCGCACATGCGGCCCTACCGGCAg               <  6:147854/149‑1 (MQ=255)                                                                                                                                      cGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTGGGCGAGCTGCTCGAGCGTAGCGCCGCGTTTCAGGt                                              <  8:59232/105‑1 (MQ=255)                                                                                                                                      cGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTGGGCGAGCTGCTCGAGCGTAGCGCCGCGTTTCAGGTAGCCGTTGCGCACATGCGGCCCTACCGGCAGCGGTGCcgggcgg  <  2:197289/149‑1 (MQ=255)                                                                                                                                                 tGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTGGGCGAGCTGCTCGAGCGTAGCGCCGCGTTTCAGGTAGCCGTTGCGCACATGCGGccc                        <  6:239895/116‑1 (MQ=255)                                                                                                                                                 tGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTGGGCGAGCTGCTCGAGCGTAGCGCCGCGTTTCAGGTAGCCGTTGCGCACATGCGGccc                        >  5:239895/1‑116 (MQ=255)                                                                                                                                                 |                                                                                                                                          CCGGGCTTTACTTTCACCGCATAGAACGGCCCGTGCTCGATGGGCGCCACGCAAGGGTTAGGGCCCTTGTGCTGTGGGTCACCCTGCTTGCGGTTGAACGGCGTGGAACCGCGGCCAAACGCCGGGTCCTGGCCGTTACGGGCATGGGTATTGAAGTCAGTGACCGTGGCGCGCAGCCCGGACGGGTCAATGCCGCAGGCCTGGGCGAGCTGCTCGAGCGTAGCGCCGCGTTTCAGGTAGCCGTTGCGCACATGCGGCCCTACCGGCAGCGGTGCCGGGCGG  >  NC_002947/2972375‑2972656

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.