New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2986914 | 33 (0.780) | 3 (0.080) | 3/242 | NT | 12.0% | coding (1485/2991 nt) | PP_2612 | membrane protein |
? | NC_002947 | = 2986958 | 13 (0.330) | coding (1441/2991 nt) | PP_2612 | membrane protein |
CTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2986761‑2986914 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgccgTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCAGCGACAACGTGATCGAAGGGCTCGCCGGTCGCTTCCCGGCCATGGCGGATATCACCGACCTCACCGCCCAGTCGGTCAATACCGTGGTGCTCAA < NC_002947/2986958‑2986813 CTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTGG > 7:145124/1‑149 GCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCA > 3:191248/1‑149 CCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCAGC < 4:191248/149‑1 ACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCAGCGA < 8:237648/149‑1 GGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCAGCGACAACGTGATCGAAGGGCTCGCCGGTCGCTTCCCGGCCATGGCGGATATCACCGACCTCACCGCCCAGTCGGTCAATACCGTGGTG < 6:209008/148‑1 GGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCAGCGACAACGTGATCGAAGGGCTCGCCGGTCGCTTCCCGGCCATGGCGGATATCACCGACCTCA > 7:211559/1‑122 GGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCAGCGACAACGTGATCGAAGGGCTCGCCGGTCGCTTCCCGGCCATGGCGGATATCACCGACCTCA < 8:211559/122‑1 CCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCAGCGACAACGTGATCGAAGGGCTCGCCGGTCGCTTCCCGGCCATGGCGGATATCACCGACCTCACCGCCCAGTCGGTCAATACCGTGGTGCTCAA < 2:178678/149‑1 CTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2986761‑2986914 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgccgTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCAGCGACAACGTGATCGAAGGGCTCGCCGGTCGCTTCCCGGCCATGGCGGATATCACCGACCTCACCGCCCAGTCGGTCAATACCGTGGTGCTCAA < NC_002947/2986958‑2986813 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |