New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3018179 | 38 (0.900) | 4 (0.100) | 4/242 | NT | 10.9% | coding (2102/2283 nt) | bcsB | cellulose synthase and translocator subunit |
? | NC_002947 | = 3018219 | 30 (0.760) | coding (2142/2283 nt) | bcsB | cellulose synthase and translocator subunit |
GCCGTTCCACGAGCAGCGCAGTGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3018030‑3018179 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagccaCCATGGCAGCGCGCCCACGAAGTAGTGCTCGCCGACGAACTGGCTGCTCACGCCACTGCTGCGTAACAGCGTTACCGAACCCGCCACCGCATCGAGCTTGCCTACATCGCCAAGCATGTCGCGCAGCAATGCGTAATCGCTGTCG < NC_002947/3018219‑3018075 GCCGTTCCACGAGCAGCGCAGTGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGC > 4:218081/1‑148 CCGTTCCACGAGCAGCGCAGTGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCA < 5:251290/149‑1 TGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCA < 3:78370/125‑1 TGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCA > 4:78370/1‑125 CAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCACCATGGCAGCGCGCCCACGAAGTAGTGCTCGCCGACG > 6:72585/1‑148 CGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCACCATGGCAGCGCGCCCACGAAGTAGTGCTCGCCGACGAACTGGCTGCTCA < 5:277343/149‑1 GATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCACCATGGCAGCGCGCCCACGAAGTAGTGCTCGCCGACGAACTGGCTGCTCAC < 5:72585/149‑1 CGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCACCATGGCAGCGCGCCCACGAAGTAGTGCTCGCCGACGAACTGGCTGCTCACGCCAC < 5:266358/149‑1 AGCCACCATGGCAGCGCGCCCACGAAGTAGTGCTCGCCGACGAACTGGCTGCTCACGCCACTGCTGCGTAACAGCGTTACCGAACCCGCCACCGCATCGAGCTTGCCTACATCGCCAAGCATGTCGCGCAGCAATGCGTAATCGCTGTC > 4:173841/1‑149 GCCACCATGGCAGCGCGCCCACGAAGTAGTGCTCGCCGACGAACTGGCTGCTCACGCCACTGCTGCGTAACAGCGTTACCGAACCCGCCACCGCATCGAGCTTGCCTACATCGCCAAGCATGTCGCGCAGCAATGCGTAATCGCTGTCG < 2:29193/149‑1 GCCGTTCCACGAGCAGCGCAGTGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3018030‑3018179 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagccaCCATGGCAGCGCGCCCACGAAGTAGTGCTCGCCGACGAACTGGCTGCTCACGCCACTGCTGCGTAACAGCGTTACCGAACCCGCCACCGCATCGAGCTTGCCTACATCGCCAAGCATGTCGCGCAGCAATGCGTAATCGCTGTCG < NC_002947/3018219‑3018075 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |