New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3018179	38 (0.900)	4 (0.100)	4/242	NT	10.9%	coding (2102/2283 nt)	bcsB	cellulose synthase and translocator subunit
	?	NC_002947	= 3018219	30 (0.760)					coding (2142/2283 nt)	bcsB	cellulose synthase and translocator subunit

CCGTTCCACGAGCAGCGCAGTGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCGTGGTGCTGTTCGCCTTCTTGTTGTGGCGGGCACTGCGCTGG  >  NC_002947/3018031‑3018327                                                                                                                                                     |                                                                                                                                                     ccGTTCCACGAGCAGCGCAGTGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCA                                                                                                                                                      <  5:251290‑M1/149‑1 (MQ=255)         cGAGCAGCGCAGTGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTtcgtcg                                                                                                                                              <  3:218081/149‑1 (MQ=255)                  cAGTGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCac                                                                                                                                      >  1:111282/1‑148 (MQ=255)                   aGTGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCacta                                                                                                                                    >  5:41091/1‑149 (MQ=255)                       ttgtGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTc                                                                                                                                >  3:173841/1‑149 (MQ=255)                          tgGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGt                                                                                                                              <  6:138401/148‑1 (MQ=255)                          tgGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTg                                                                                                                             >  6:37893/1‑149 (MQ=255)                            gCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTggg                                                                                                                           >  4:185249/1‑149 (MQ=255)                                   tGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTg                                                                                                                    >  4:24727/1‑149 (MQ=255)                                       cAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAccatggcagcgcgcccacgaagtagtgctcgccgacg                                                                                                                 >  6:72585‑M1/1‑111 (MQ=255)                                             cgacagcgaTTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGtggc                                                                                                          <  2:29193‑M2/149‑5 (MQ=255)                                              gacagcgaTTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGtggct                                                                                                         >  4:173841‑M2/1‑144 (MQ=255)                                                  gcgaTTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGgctgctg                                                                                                     <  3:185249/149‑1 (MQ=255)                                                  gcgaTTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGgctgctg                                                                                                     >  7:239163/1‑149 (MQ=255)                                                   cgaTTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAccatggcagcgcgcccacgaagtagtgctcgccgacgaactggctgctca                                                                                                    <  5:277343‑M1/149‑51 (MQ=255)                                                    gaTTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAccatggcagcgcgcccacgaagtagtgctcgccgacgaactggctgctcac                                                                                                   <  5:72585‑M1/149‑52 (MQ=255)                                                    gaTTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGgctgctgct                                                                                                   >  3:79224/1‑149 (MQ=255)                                                         cGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAccatggcagcgcgcccacgaagtagtgctcgccgacgaactggctgctcacgccac                                                                                              <  5:266358‑M1/149‑57 (MQ=255)                                                           aaTTGCTGAGCGACATGCTTGTCGATGTAGGCAAGCTCTATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCTTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTc                                                                                            <  2:207369/148‑1 (MQ=255)                                                                 tgcGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGTGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTg                                                                                      >  7:250505/1‑149 (MQ=255)                                                                   cgcgACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGt                                                                                     <  6:41091/148‑1 (MQ=255)                                                                      gACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGa                                                                                 <  1:29193/149‑1 (MQ=255)                                                                         aTGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGa                                                                                 >  7:191158/1‑146 (MQ=255)                                                                         aTGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGa                                                                                 <  8:191158/146‑1 (MQ=255)                                                                            cTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGTCGAGCACTACTTCGTGGGCGCGCTGCCATTGTGgctgctgct                                                                                                   <  6:70693/125‑1 (MQ=255)                                                                            cTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATTGTGgctgctgct                                                                                                   >  5:70693/1‑125 (MQ=255)                                                                             ttGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGTGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCt                                                                          <  8:250505/149‑1 (MQ=255)                                                                                        ggCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTgg                                                                <  4:87277/148‑1 (MQ=255)                                                                                        ggCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTgg                                                                >  3:87277/1‑148 (MQ=255)                                                                                        ggCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGc                                                               >  4:227918/1‑149 (MQ=255)                                                                                          cAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCgg                                                             >  6:22963/1‑149 (MQ=255)                                                                                           aaGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGt                                                            <  5:22963/149‑1 (MQ=255)                                                                                                       gTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGt                                                >  6:95558/1‑149 (MQ=255)                                                                                                          gCGGGTTCGTTAACGCTGTTACGCAGCAGGGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGATCACCCTGTGTTGCTGGCGGTGATCGCGGCTGttt                                              <  7:112602/148‑1 (MQ=255)                                                                                                                tCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCgtggt                                       >  8:49675/1‑149 (MQ=255)                                                                                                                 cGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCgtggt                                       <  3:227918/148‑1 (MQ=255)                                                                                                                  ggTAAGGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCCCCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCgtggtg                                      <  8:239163/148‑1 (MQ=255)                                                                                                                          tGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCt                                                  <  6:191659/128‑1 (MQ=255)                                                                                                                          tGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCt                                                  >  5:191659/1‑128 (MQ=255)                                                                                                                                gcagcaGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCGTGGTGCTGTTCGCCTTCttg                       <  5:95558/149‑1 (MQ=255)                                                                                                                                gcagcaGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCGTGGTGCTGTTCGCCTTCttg                       >  7:254150/1‑149 (MQ=255)                                                                                                                                   gcagTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCGTGGTGCTGTTCGCCTTCttgttg                    >  6:267051/1‑149 (MQ=255)                                                                                                                                     agTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTGGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCGTGGTGCTGTTCGCCTTCTTGTtgtg                  <  8:161332/149‑1 (MQ=255)                                                                                                                                      gTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGtggctgctcacgccactgctgcgtaacagcgttaccgaacccgccaccgcatcgagcttgcctacatcgccaagcatgtcgcgcagcaatgcg                 <  5:266358‑M2/149‑94 (MQ=255)                                                                                                                                        ggCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCGTGGTGCTGTTCGCCTTCTTGTTGTGGc                <  8:254150/148‑1 (MQ=255)                                                                                                                                         gCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCGTGGTGCTGTTCGCCTTCTTGTTGTGGCg               <  3:24727/148‑1 (MQ=255)                                                                                                                                           gTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGtggctgctcacgccactgctgcgtaacagcgttaccgaacccgccaccgcatcgagcttgcctacatcgccaagcatgtcgcgcagcaatgcgtaatc            <  5:72585‑M2/149‑99 (MQ=255)                                                                                                                                            tGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGtggctgctcacgccactgctgcgtaacagcgttaccgaacccgccaccgcatcgagcttgcctacatcgccaagcatgtcgcgcagcaatgcgtaatcg           <  5:277343‑M2/149‑100 (MQ=255)                                                                                                                                                 agcCAccatggcagcgcgcccacgaagtagtgctcgccgacgaactggctgctcacgccactgctgcgtaacagcgttaccgaacccgccaccgcatcgagcttgcctacatcgccaagcatgtcgcgcagcaatgcgtaatcgctgtc      >  4:173841‑M1/1‑5 (MQ=255)                                                                                                                                                  gcCAccatggcagcgcgcccacgaagtagtgctcgccgacgaactggctgctcacgccactgctgcgtaacagcgttaccgaacccgccaccgcatcgagcttgcctacatcgccaagcatgtcgcgcagcaatgcgtaatcgctgtcg     <  2:29193‑M1/149‑146 (MQ=255)                                                                                                                                                     aGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCGTGGTGCTGTTCGCCTTCTTGTTGTGGCGGGCACTGCGCTgg  <  5:37893/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CCGTTCCACGAGCAGCGCAGTGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCGTGGTGCTGTTCGCCTTCTTGTTGTGGCGGGCACTGCGCTGG  >  NC_002947/3018031‑3018327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.