| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3292622 = | 40 (0.950) | 3 (0.080) | 3/240 | NT | 8.7% | coding (1906/3675 nt) | PP_2893 | hypothetical protein |
| ? | NC_002947 | 3292688 = | 26 (0.660) | coding (1972/3675 nt) | PP_2893 | hypothetical protein | |||||
GAGCGCCAGCAGTGGGCCCCGAAGTCGAGCTGGCCGCTGGCCAGCCGCTGCAGGCGTGCAGGCGCCTGCAACTGCCACTCCTGGCCACCGGCCTGGATTCGGCCAGTGGCCAGTCGGCCGCGCCAGTCACCTTTGTTCAACTGGCCATCCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3292776‑3292622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccaggccGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTGGCGACGACCAGCGACTGGCCCCCGAACCGCGCCTGCGC > NC_002947/3292688‑3292834 GAGCGCCAGCAGTGGGCCCCGAAGTCGAGCTGGCCGCTGGCCAGCCGCTGCAGGCGGGCAGGCGCCTGCAACTGCCACTCCTGGCCACCGGCCTGGATTCGGCCAGTGGCCAGTCGGCCGCGCCAGTCACCTTTGTTCAACTGGCCATC < 2:19359/149‑1 CAGCAGTGGGCCCCGAAGTCGAGCTGGCCGCTGGCCAGCCGCTGCAGGCGTGCAGGCGCCTGCAACTGCCACTCCTGGCCACCGGCCTGGATTCGGCCAGTGGCCAGTCGGCCGCGCCAGTCACCTTTGTTCAACTGGCCATCCAGGCC < 6:211073/149‑1 GGCCTGGATTCGGCCAGTGGCCAGTCGGCCGCGCCAGTCACCTTTGTTCAACTGGCCATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTG > 6:242194/1‑149 GCCTGGATTCGGCCAGTGGCCAGTCGGCCGCGCCAGTCACCTTTGTTCAACTGGCCATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGG > 1:97441/1‑149 GCCGCGCCAGTCACCTTTGTTCAACTGGCCATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTGG < 2:97441/149‑1 CCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTGGCGACGACCAGCGACTGGCCCCCGAACCGCGC > 4:75336/1‑148 AGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTGGCGACGACCAGCGACTGGCCCCCGAACCGCGCCTG < 2:149063/149‑1 CGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTGGCGACGACCAGCGACTGGCCCCCGAACCGCGCCTGCGC > 2:260299/1‑148 CGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGC > 3:24629/1‑88 CGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGC < 4:24629/88‑1 GAGCGCCAGCAGTGGGCCCCGAAGTCGAGCTGGCCGCTGGCCAGCCGCTGCAGGCGTGCAGGCGCCTGCAACTGCCACTCCTGGCCACCGGCCTGGATTCGGCCAGTGGCCAGTCGGCCGCGCCAGTCACCTTTGTTCAACTGGCCATCCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3292776‑3292622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccaggccGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTGGCGACGACCAGCGACTGGCCCCCGAACCGCGCCTGCGC > NC_002947/3292688‑3292834 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |