New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3292622 =	40 (0.950)	3 (0.080)	3/240	NT	8.7%	coding (1906/3675 nt)	PP_2893	hypothetical protein
	?	NC_002947	3292688 =	26 (0.660)					coding (1972/3675 nt)	PP_2893	hypothetical protein

GTTGCAGGCCAACGGCAAGGGCGACATTCGCCAACAGGCCTTGACCCTGGCGCTGGACGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTGGCGACGACCAGCGACTGGCCCCCGAACCGCGCCTGCGC  >  NC_002947/3292540‑3292834                                                                                                                                                     |                                                                                                                                                   gTTGCAGGCCAACGGCAAGGGCGACATTCGCCAACAGGCCTTGACCCTGGCGCTGGACGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCg                                                                                                                                                    >  8:139572/1‑149 (MQ=255)  ttGCAGGCCAACGGCAAGGGCGACATTCGCCAACAGGCCTTGACCCTGGCGCTGGACGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCgg                                                                                                                                                   >  2:17839/1‑149 (MQ=255)   tGCAGGCCAACGGCAAGGGCGACATTCGCCAACAGGCCTTGACCCTGGCGCTGGACGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGt                                                                                                                                                  >  6:83914/1‑149 (MQ=255)    gCAGGCCAACGGCAAGGGCGACATTCGCCAACAGGCCTTGACCCTGGCGCTGGACGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTg                                                                                                                                                 >  2:54784/1‑149 (MQ=255)    gCAGGCCAACGGCAAGGGCGACATTCGCCAACAGGCCTTGACCCTGGCGCTGGACGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTg                                                                                                                                                 >  1:71749/1‑149 (MQ=255)           aaCGGCAAGGGCGACATTCGCCAACAGGCCTTGACCCTGGCGCTGGACGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGa                                                                                                                                          <  7:139572/149‑1 (MQ=255)            aCGGCAAGGGCGACATTCGCCAACAGGCCTTGACCCTGGCGCTGGACGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAg                                                                                                                                         >  7:54774/1‑149 (MQ=255)              ggCAAGGGCGACATTCGCCAACAGGCCTTGACCCTGGCGCTGGACGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTg                                                                                                                                       >  1:64596/1‑149 (MQ=255)                cAAGGGCGACATTCGCCAACAGGCCTTGACCCTGGCGCTGGACGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGc                                                                                                                                     <  2:64596/149‑1 (MQ=255)                     gCGACATTCGCCAACAGGCCTTGACCCTGGCGCTGGACGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTg                                                                                                                                >  2:234118/1‑149 (MQ=255)                                    aGGCCTTGACCCTGGCGCTGGCCGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGGGACTGGCGCGGCCGGCTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGcgcctgcacgc                                                                                                                 <  3:5377/149‑1 (MQ=255)                                    aGGCCTTGACCCTGGCGCTGGACGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGcgcctgcacgc                                                                                                                 <  1:234118/149‑1 (MQ=255)                                     ggCCTTGACCCTGGCGCTGGACGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGcgcctgcacgcc                                                                                                                <  4:51345/149‑1 (MQ=255)                                              ccTGGCGCTGGACGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGc                                                                                                       <  6:14009/149‑1 (MQ=255)                                              ccTGGCGCTGGACGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGc                                                                                                       >  4:4709/1‑149 (MQ=255)                                                     cTGGACGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTggccag                                                                                                <  8:54774/149‑1 (MQ=255)                                                        gccGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAACGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGTCCGGGGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTggccagc                                                                                               <  7:7543/145‑1 (MQ=255)                                                        gACGGCCCGCAGCTCAAGCTCTACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTggccagc                                                                                               <  8:231001/147‑1 (MQ=255)                                                                         gCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGcgcctgcacgcct                                                                                                               >  5:25040/1‑114 (MQ=255)                                                                         gCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGcgcctgcacgcct                                                                                                               <  6:25040/114‑1 (MQ=255)                                                                         gCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCgggg                                                                            <  5:83914/149‑1 (MQ=255)                                                                             gACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCa                                                                        >  7:8289/1‑149 (MQ=255)                                                                               ccTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGACTGGCCAGCGGCCAGCTCGACTTCGGGGCCCAct                                                                      <  6:108350/149‑1 (MQ=255)                                                                                   ggcctggattcggccagtggccagtcggccgcgccagtcacctttgttcaactggccatccaggccGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCActgctg                                                                  >  6:242194‑M2/67‑149 (MQ=255)                                                                                   GGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCActgctg                                                                  <  6:211073‑M1/149‑1 (MQ=255)                                                                                    gcctggattcggccagtggccagtcggccgcgccagtcacctttgttcaactggccatccaggccGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTgg                                                                 >  1:97441‑M2/66‑149 (MQ=255)                                                                                         GATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCCCGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTc                                                            <  2:19359‑M1/149‑1 (MQ=255)                                                                                               cAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCa                                                      <  5:211073/149‑1 (MQ=255)                                                                                                aGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAg                                                     >  3:14087/1‑149 (MQ=255)                                                                                                          aGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCtgt                                           <  8:8289/149‑1 (MQ=255)                                                                                                              gccgcgccagtcacctttgttcaactggccatccaggccGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTgg                                       <  2:97441‑M2/110‑1 (MQ=255)                                                                                                                   gcgcGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTGGcgac                                   <  7:252661/148‑1 (MQ=255)                                                                                                                     gcgGCCGACTGGCCACTGGCCGAATCCAGGCCGGGGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTGGCgacgac                                <  8:166507/149‑1 (MQ=255)                                                                                                                                gccactggccGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTGGCGACGACCAGCGACTGGc                     >  6:130007/1‑149 (MQ=255)                                                                                                                                  cactggccGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTGGCGACGACCAGCGACTGGccc                   >  4:225110/1‑149 (MQ=255)                                                                                                                                    ctggccGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTGGCGACGACGAGCGACTGGccccc                 >  1:228334/1‑149 (MQ=255)                                                                                                                                          gAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTGGCGACGACCAGCGACTGGCCCCCGAACcg           >  1:128780/1‑149 (MQ=255)                                                                                                                                              ccaggccGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTGGCGACGACCAGCGACTGGCCCCCGAACCgcgc        >  4:75336‑M2/8‑148 (MQ=255)                                                                                                                                                aggccGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTGGCGACGACCAGCGACTGGCCCCCGAACCGCGCCTg     <  2:149063‑M2/144‑1 (MQ=255)                                                                                                                                                    cGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGgcgc                                                              <  4:24629‑M2/87‑1 (MQ=255)                                                                                                                                                    cGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGgcgc                                                              >  3:24629‑M2/2‑88 (MQ=255)                                                                                                                                                    cGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTGGCGACGACCAGCGACTGGCCCCCGAACCGCGCCTgcgc  >  2:260299‑M2/2‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GTTGCAGGCCAACGGCAAGGGCGACATTCGCCAACAGGCCTTGACCCTGGCGCTGGACGGCCCGCAGCTCAAGCTCGACCTTGGCCTGGATGGCCAGTTGAACAAAGGTGACTGGCGCGGCCGACTGGCCACTGGCCGAATCCAGGCCGGTGGCCAGGAGTGGCAGTTGCAGGCGCCTGCACGCCTGCAGCGGCTGGCCAGCGGCCAGCTCGACTTCGGGGCCCACTGCTGGCGCTCCGGCCAGGCAAGCCTGTGTGGCGACGACCAGCGACTGGCCCCCGAACCGCGCCTGCGC  >  NC_002947/3292540‑3292834

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.