New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 329840240 (0.950)3 (0.070) 3/248 NT 7.4% coding (619/2319 nt) pvdQ acyl‑homoserine lactone acylase PvdQ
?NC_002947 = 3298453 37 (0.910)coding (670/2319 nt) pvdQ acyl‑homoserine lactone acylase PvdQ

ATGGTGAGTGGGTGCGGCCCATCAGCAGCCAGGATCTGGTCAAACTGACCCGCCGGTTACTGGCCGAGGGCGGTGTCGGGCAGTTCGTCGAGGCGTTGGCAGGGGCGCAACCGCCAACGCTGGCCCGTGCGCAATCGTCAGCGGGCTTTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3298250‑3298402
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccaCCGCATTGCTGCCGCGCTCCGCGGCGAACCGCTCCTGCCGGGCCAACGCGCTGGCAAAGCCCGCTGACGATTGCGCACGGGCCAGCGTTGGCGGTTGCGCCCCTGCCAACGCCTCGACGAACTGCCCGACACCGCCCTCGGC  <  NC_002947/3298453‑3298312
                                                                                                                                                                                                                                                                                                       
ATGGTGAGTGGGTGCGGCCCATCAGCAGCCAGGATCTGGTCAAACTGACCGGCCGGTTACTGGCCGAGGGCGGTGTCGGGCAGTTCGTCGAGGCGTTGGCAGGGGCGCAACCGCCAACGCTGGCCCGTGCGCAATCGTCAGCGGGCTTT                                                                                                                                                    <  3:137123/149‑1
   GTGAGTGGGTGCGGCCCATCAGCAGCCAGGATCTGGTCAAACTGACCCGCCGGTTACTGGCCGAGGGCGGTGTCGGGCAGTTCGTCGAGGCGTTGGCAGGGGCGCAACCGCCAACGCTGGCCCGTGCGCAATCGTCAGCGGGCTTTGC                                                                                                                                                  <  4:233287/148‑1
    TGAGTGGGTGCGGCCCATCAGCAGCCAGGATCTGGTCAAACTGACCCGCCGGTTACTGGCCGAGGGCGGTGTCGGGCAGTTCGTCGAGGCGTTGGCAGGGGCGCAACCGCCAACGCTGGCCCGTGCGCAATCGTCAGCGGGCTTTGCCA                                                                                                                                                <  7:36002/149‑1
      AGTGGGTGCGGCCCATCAGCAGCCAGGATCTGGTCAAACTGACCCGCCGGTTACTGGCCGAGGGCGGTGTCGGGCAGTTCGTCGAGGCGTTGGCAGGGGCGCAACCGCCAACGCTGGCCCGTGCGCAATCGTCAGCGGGCTTT                                                                                                                                                    <  5:45588/143‑1
      AGTGGGTGCGGCCCATCAGCAGCCAGGATCTGGTCAAACTGACCCGCCGGTTACTGGCCGAGGGCGGTGTCGGGCAGTTCGTCGAGGCGTTGGCAGGGGCGCAACCGCCAACGCTGGCCCGTGCGCAATCGTCAGCGGGCTTT                                                                                                                                                    >  6:45588/1‑143
            TGCGGCCCATCAGCAGCCAGGATCTGGTCAAACTGACCCGCCGGTTACTGGCCGAGGGCGGTGTCGGGCAGTTCGTCGAGGCGTTGGCAGGGGCGCAACCGCCAACGCTGGCCCGTGCGCAATCGTCAGCGGGCTTT                                                                                                                                                    >  1:34416/1‑137
            TGCGGCCCATCAGCAGCCAGGATCTGGTCAAACTGACCCGCCGGTTACTGGCCGAGGGCGGTGTCGGGCAGTTCGTCGAGGCGTTGGCAGGGGCGCAACCGCCAACGCTGGCCCGTGCGCAATCGTCAGCGGGCTTT                                                                                                                                                    <  2:34416/137‑1
                                                               cgGAGGGCGGTGTCGGGCAGTTCGTCGAGGCGTTGGCAGGGGCGCTACCGCCAACGATGGCCCGTGCGCAATCGTCAGCGGGCTTTGCCACCGCATTGCTGCCGCGCTCCGCGGCGAACCGCTCCTGGCGGGCCAACGCGCTGGCAAAG                                                                                     <  2:83537/147‑1
                                                                                        CGAGGCGTTGGCAGGGGCGCAACCGCCAACGCTGGCCCGTGCGCAATCGTCAGCGGGCTTTGCCACCGCATTGCTGCCGCGCTCCGCGGCGAACCGCTCCTGCCGGGCCAACGCGCTGGCA                                                                                        <  1:26064/121‑1
                                                                                        CGAGGCGTTGGCAGGGGCGCAACCGCCAACGCTGGCCCGTGCGCAATCGTCAGCGGGCTTTGCCACCGCATTGCTGCCGCGCTCCGCGGCGAACCGCTCCTGCCGGGCCAACGCGCTGGCA                                                                                        >  2:26064/1‑121
                                                                                                                                                    TGCCACCGCATTGCTGCCGCGCTCCGCGGCGAACCGCTCCTGCCGGGCCAACGCGCTGGCAAAGCCCGCTGACGATTGCGCACGGGCCAGCGTTGGCGGTTGCGCCCCTGCCAACGCCTCGACGAACTGCCCGACACCGCCCTCGGC  >  3:247014/1‑147
                                                                                                                                                                                                                                                                                                       
ATGGTGAGTGGGTGCGGCCCATCAGCAGCCAGGATCTGGTCAAACTGACCCGCCGGTTACTGGCCGAGGGCGGTGTCGGGCAGTTCGTCGAGGCGTTGGCAGGGGCGCAACCGCCAACGCTGGCCCGTGCGCAATCGTCAGCGGGCTTTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3298250‑3298402
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccaCCGCATTGCTGCCGCGCTCCGCGGCGAACCGCTCCTGCCGGGCCAACGCGCTGGCAAAGCCCGCTGACGATTGCGCACGGGCCAGCGTTGGCGGTTGCGCCCCTGCCAACGCCTCGACGAACTGCCCGACACCGCCCTCGGC  <  NC_002947/3298453‑3298312

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.