New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3751094	44 (1.040)	3 (0.070)	3/248	NT	7.2%	coding (2789/2823 nt)	PP_3316	chaperone‑associated ATPase
	?	NC_002947	= 3751175	35 (0.860)					coding (2708/2823 nt)	PP_3316	chaperone‑associated ATPase

GAGAAACCGCAGCCTTCGGCCTGCGCTTCACGCATTTTCACTGTCGAGCTCTTTGGCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3751033‑3751094 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgGCGGCATTGGCAAGGGTGATCACGCCCATGTGCGCTGGGACGACAAGGCGGAGCGGGTCGGGTTCGACCGCCGGCAAGCCGCGCCGGCCAAAGAGCTCGACAGTGAAAATGCGTGAAGCGCAGGCCGAAGGCTGCGGTTTCTCGT  <  NC_002947/3751175‑3751031                                                                                                                                                                                                                 GAGAAACCGCAGCCTTCGGCCTGCGCTTCACGCATTTTCACTGTCGAGCTCTTTGGCCGGCGGCGGCATTGGCAAGGGTGATCACGCCCATGTGCGCTGGGACGACAAGGCGGAGCGGGTCGGGTTCGACCGCCGGCAAGCCGCGCCGG                                                            <  6:58972/149‑1        CGCAGCCTTCGGCCTGCGCTTCACGCATTTTCACTGTCGAGCTCTTTGGCCGGCGGCGGCATTGGCAAGGGTGATCACGCCCATGTGCGCTGGGACGACAAGGCGGAGCGGGTCGGGTTCGACCGCCGGCAAGCCGCGCCGGCCAAAG                                                      <  5:262983/148‑1        CGCAGCCTTCGGCCTGCGCTTCACGCATTTTCACTGTCGAGCTCTTTGGCCGGCGGCGGCATTGGCAAGGGTGATCACGCCCATGTGCGCTGGGACGACAAGGCGGAGCGGGTCGGGTTCGACCGCCGGCAAGCCGCGCCGGCCAAAG                                                      >  6:262983/1‑148                                                           GGCGGCGGCATTGGCAAGGGTGATCACGCCCATGTGCGCTGGGACGACAAGGCGGAGCGGGTCGGGTTCGACCGCCGGCAAGCCGCGCCGGCCAAAGAGCTCGACAGTGAAAATGCGTGAAGCGCAGGCCGAAGGCTGCGGTTTCTCGT  <  3:66123/149‑1                                                              GGCGGCATTGGCAAGGGTGATCACGCCCATGTGCGCTGGGACGACAAGGCGGAGCGGGTCGGGTTCGACCGCCGGCAAGCCGCACCGGCCAAAGAGCTCGACAGTGAAAATGCGTGAAGCGCAGGCCGAAGGCTGCGG          <  5:124409/138‑1                                                              GGCGGCATTGGCAAGGGTGATCACGCCCATGTGCGCTGGGACGACAAGGCGGAGCGGGTCGGGTTCGACCGCCGGCAAGCCGCACCGGCCAAAGAGCTCGACAGTGAAAATGCGTGAAGCGCAGGCCGAAGGCTGCGG          >  6:124409/1‑138                                                                                                                                                                                                                 GAGAAACCGCAGCCTTCGGCCTGCGCTTCACGCATTTTCACTGTCGAGCTCTTTGGCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3751033‑3751094 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgGCGGCATTGGCAAGGGTGATCACGCCCATGTGCGCTGGGACGACAAGGCGGAGCGGGTCGGGTTCGACCGCCGGCAAGCCGCGCCGGCCAAAGAGCTCGACAGTGAAAATGCGTGAAGCGCAGGCCGAAGGCTGCGGTTTCTCGT  <  NC_002947/3751175‑3751031

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.