New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3751094	44 (1.040)	3 (0.070)	3/248	NT	7.2%	coding (2789/2823 nt)	PP_3316	chaperone‑associated ATPase
	?	NC_002947	= 3751175	35 (0.860)					coding (2708/2823 nt)	PP_3316	chaperone‑associated ATPase

ACGAGAAACCGCAGCCTTCGGCCTGCGCTTCACGCATTTTCACTGTCGAGCTCTTTGGCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCGGGCTTGTAGCCGACTTGCGCCAAGTGATCGACCAGTGTCTCGTCGAACGTCAGCGTCACGCCCTGGCTC  >  NC_002947/3751031‑3751321                                                                                                                                                 |                                                                                                                                                    aCGAGAAACCGCAGCCTTCGGCCTGCGCTTCACGCATTTTCACTGTCGAGCTCTTTGGCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCcgcc                                                                                                                                                 <  3:66123‑M2/149‑5 (MQ=255)   gagaAACCGCAGCCTTCGGCCTGCGCTTCACGCATTTTCACTGTCGAGCTCTTTGGCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGa                                                                                                                                               <  4:66123/149‑1 (MQ=255)   gagaAACCGCAGCCTTCGGCCTGCGCTTCACGCATTTTCACTGTCGAGCTCTTTGGCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGa                                                                                                                                               <  4:98118/149‑1 (MQ=255)     gaAACCGCAGCCTTCGGCCTGCGCTTCACGCATTTTCACTGTCGAGCTCTTTGGCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAg                                                                                                                                              >  4:262247/1‑148 (MQ=255)        aCCGCAGCCTTCGGCCTGCGCTTCACGCATTTTCACTGTCGAGCTCTTTGGCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTAGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCAtt                                                                                                                                          >  5:38294/1‑149 (MQ=255)         ccGCAGCCTTCGGCCTGCGCTTCACGCATTTTCACTGTCGAGCTCTTTGGCCGGTGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCc                                                                                                                                                    >  6:124409‑M2/1‑137 (MQ=255)         ccGCAGCCTTCGGCCTGCGCTTCACGCATTTTCACTGTCGAGCTCTTTGGCCGGTGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCc                                                                                                                                                    <  5:124409‑M2/138‑2 (MQ=255)               ccTTCGGCCTGCGCTTCACGCATTTTCACTGTCGAGCTCTTTGGCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTg                                                                                                                                   <  7:97717/149‑1 (MQ=255)                       cTGCGCTTCACGCATTTTCACTGTCGAGCTCTTTGGCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGcc                                                                                                                           >  3:211251/1‑149 (MQ=255)                          cgcTTCACGCATTTTCACTGTCGAGCTCTTTGGCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGtc                                                                                                                        <  5:18230/149‑1 (MQ=255)                             ttCACGCATTTTCACTGTCGAGCTCTTTGGCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTcc                                                                                                                     <  3:41989/149‑1 (MQ=255)                                    aTTTTCACTGTCGAGCTCTTTGGCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCAc                                                                                                                                      >  4:716/1‑125 (MQ=255)                                    aTTTTCACTGTCGAGCTCTTTGGCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCAc                                                                                                                                      <  3:716/125‑1 (MQ=255)                                                  gCTCTTTGGCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGc                                                                                               <  6:38294/149‑1 (MQ=255)                                                     ctTTGGCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCcgccggccaaagagctcgacagtgaaaatgcgtgaagcgcaggccgaaggctgcg                                                                                              <  5:262983‑M2/148‑56 (MQ=255)                                                     ctTTGGCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCcgccggccaaagagctcgacagtgaaaatgcgtgaagcgcaggccgaaggctgcg                                                                                              >  6:262983‑M2/1‑93 (MQ=255)                                                      tttGGCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTg                                                                                            >  8:92684/1‑148 (MQ=255)                                                          gCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTc                                                                                                 <  6:84053/139‑1 (MQ=255)                                                          gCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTc                                                                                                 >  5:84053/1‑139 (MQ=255)                                                           ccGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCcgccggccaaagagctcgacagtgaaaatgcgtgaagcgcaggccgaaggctgcggtttctc                                                                                       <  6:58972‑M2/149‑63 (MQ=255)                                                           ccGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAg                                                                                                   >  4:219536/1‑136 (MQ=255)                                                           ccGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAg                                                                                                   <  3:219536/136‑1 (MQ=255)                                                           ccGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTcg                                                                                      >  8:102638/1‑149 (MQ=255)                                                            cGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTcgc                                                                                     <  7:92684/149‑1 (MQ=255)                                                                  ggCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCAc                                                                               >  7:77526/1‑149 (MQ=255)                                                                   gCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCAcc                                                                              <  7:102638/149‑1 (MQ=255)                                                                     ttGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCg                                                                             >  5:91182/1‑148 (MQ=255)                                                                          ggcggTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCg                                                                       >  3:108148/1‑149 (MQ=255)                                                                          ggcggTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCg                                                                       <  6:230423/149‑1 (MQ=255)                                                                             ggTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCGGGc                                                                    <  8:77526/149‑1 (MQ=255)                                                                                 gAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCg                                                                       <  1:129389/142‑1 (MQ=255)                                                                                 gAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCg                                                                       >  2:129389/1‑142 (MQ=255)                                                                                    cccgacccgCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCGGGCTTGTAGc                                                             >  3:67556/1‑149 (MQ=255)                                                                                       gacccgCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCGGGCTTGTAGCCGa                                                          <  3:262247/149‑1 (MQ=255)                                                                                                       tcgtcCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCGGGCTTGTAGCCGACTTGCGCCAAGTGATc                                          <  6:91182/149‑1 (MQ=255)                                                                                                         gtcCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCGGGCTTGTAGCCGACTTgc                                                     >  2:135265/1‑136 (MQ=255)                                                                                                         gtcCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCGGGCTTGTAGCCGACTTgc                                                     <  1:135265/136‑1 (MQ=255)                                                                                                          tcCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCGGGCTTGTAGCCGACTTGCGCCAAGTGATCGAc                                       >  1:173656/1‑149 (MQ=255)                                                                                                          tcCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCGGGCTTGTAGCCGACTTGCGCCAAGTGATCGAc                                       >  3:10062/1‑149 (MQ=255)                                                                                                              aGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCGGGCTTGTAGCCGACTTGCGCCAAGTGATCGACCAgt                                   <  1:266101/149‑1 (MQ=255)                                                                                                                         gCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCGGGCTTGTAGCCGACTTGCGCCAAGTGATCGACCAGTGTCTCGTCGaa                        >  5:78110/1‑149 (MQ=255)                                                                                                                          cGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCGGGCTTGTAGCCGACTTGCGCCAAGTGATCGACCAGTGTCTCGTCGAAc                       <  6:78110/149‑1 (MQ=255)                                                                                                                              aTCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCGGGCTTGTAGCCGACTTGCGCCAAGTGATCGACCAGTGTCTCGTCGAACGt                     >  3:104492/1‑147 (MQ=255)                                                                                                                                   ccTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGCAGCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCGGGCTTGTAGCCGACTTGCGCCAAGTGATCGACCAGTGTCTCGTCGAACGTCAGCGt               >  1:67001/1‑149 (MQ=255)                                                                                                                                              ccgccgccgAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCGGGCTTGTAGCCGACTTGCGCCAAGTGATCGACCAGTGTCTCGTCGAACGTCAGCGTCACGCCCTGGc    <  2:10646/148‑1 (MQ=255)                                                                                                                                               cgccgccgAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCGGGCTTGTAGCCGACTTGCGCCAAGTGATCGACCAGTGTCTCGTCGAACGTCAGCGTCACGCCCTGGCTc  <  4:67556/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                    ACGAGAAACCGCAGCCTTCGGCCTGCGCTTCACGCATTTTCACTGTCGAGCTCTTTGGCCGGCGCGGCTTGCCGGCGGTCGAACCCGACCCGCTCCGCCTTGTCGTCCCAGCGCACATGGGCGTGATCACCCTTGCCAATGCCGCCGCCGAGCATTTCACGTGCCAGTGCCGTCTCCAGC‑TCGCTGCGGATCAGTCGCTTGAGCTCGCGGGCACCGAATTCGGGCTTGTAGCCGACTTGCGCCAAGTGATCGACCAGTGTCTCGTCGAACGTCAGCGTCACGCCCTGGCTC  >  NC_002947/3751031‑3751321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.