| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3785603 | 39 (0.920) | 4 (0.100) | 3/244 | NT | 9.7% | coding (798/1146 nt) | PP_3348 | GGDEF domain‑containing protein |
| ? | NC_002947 | = 3785643 | 38 (0.950) | coding (838/1146 nt) | PP_3348 | GGDEF domain‑containing protein | |||||
GAACTGACCGGCCTGAACAACCGACGTGCTTTTTTCGACAATGCTTCGGCGCAGCACGTCCGGTGCAGGGATGCGGGTACATTCATGGCCGTGTTGATGCTGGACGTCGACCATTTCAAACAGATCAACGACACGTTCGGGCATGCCGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3785451‑3785603‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaggcTGGCACTGATCGCTGCACCGATGCGCTGCAGCACCTGGTCGCCTGCGGCATGCCCGAACGTGTCGTTGATCTGTTTGAAATGGTCGACGTCCAGCATCAACACGGCCATGAATGTACCCGCATCCCTGCACCGGACGTGCTGCGCC < NC_002947/3785643‑3785498 GAACTGACCGGCCTGAACAACCGACGTGCTTTTTTCGACAATGCTTCGGCGCAGCACGTCCGGTGCAGGGATGCGGGTACATTCATGGCCGTGTTGATGCTGGACGTCGACCATTTCAAACAGATCAACGACACGTTCGGGCATGCCG > 1:76120/1‑148GAACTGACCGGCCTGAACAACCGACGTGCTTTTTTCGACAATGCTTCGGCGCAGCACGTCCGGTGCAGGGATGCGGGTACATTCATGGCCGTGTTGATGCTGGACGTCGACCATTTCAAACAGATCAACGACACGTTCGGGCATGCCG > 2:65033/1‑148 ACTGACCGGCCTGAACAACCGACGTGCTTTTTTCGACAATGCTTCGGCGCAGCACGTCCGGTGCAGGGATGCGGGTACATTCATGGCCGTGTTGATGCTGGACGTCGACCATTTCAAACAGATCAACGACACGTTCGGGCATGCCGCAG > 2:12020/1‑149 ACTGACCGGCCTGAACAACCGACGTGCTTTTTTCGACAATGCTTCGGCGCAGCACGTCCGGTGCAGGGATGCGGGTACATTCATGGCCGTGTTGATGCTGGACGTCGACCATTTCAAACAGATCAACGACACGTTCGGGCATGCCGCAG > 8:150348/1‑149 GTCCGGTGCAGGGATGCGGGTACATTCATGGCCGTGTTGATGCTGGACGTCGACCATTTCAAACAGATCAACGACACGTTCGGGCATGCCGCAGGCTGGCACTGATCGCTGCACCGATGCGCTGCAGCACCTGGTCGCCTGCGGCATGC < 5:137708/149‑1 GTCCGGTGCAGGGATGCGGGTACATTCATGGCCGTGTTGATGCTGGACGTCGACCATTTCAAACAGATCAACGACACGTTCGGGCATGCCGCAGGCTGGCACTGATCGCTGCACCGATGCGCTGCAGCACCTGGTCGCCTGCGGCATGC < 7:3149/149‑1 TCCGGTGCAGGGATGCGGGTACATTCATGGCCGTGTTGATGCTGGACGTCGACCATTTCAAACAGATCAACGACACGTTCGGGCATGCCGCAGGCTGGCACTGATCGCTGCACCGATGCGCTGCAGCACCTGGTCGCCTGCGGCAT < 1:116480/146‑1 TCCGGTGCAGGGATGCGGGTACATTCATGGCCGTGTTGATGCTGGACGTCGACCATTTCAAACAGATCAACGACACGTTCGGGCATGCCGCAGGCTGGCACTGATCGCTGCACCGATGCGCTGCAGCACCTGGTCGCCTGCGGCAT > 2:116480/1‑146 CGCAGGCTGGCACTGATCGCTGCACCGATGCGCTGCAGCACCTGGTCGCCTGCGGCATGCCCGAACGTGTCGTTGATCTGTTTGAAATGGTCGACGTCCAGCATCAACACGGCCATGAATGTACCCGCATCCCTGCACCGGACGTGCTG > 1:65033/1‑149 CGCAGGCTGGCACTGATCGCTGCACCGATGCGCTGCAGCACCTGGTCGCCTGCGGCATGCCCGAACGTGTCGTTGATCTGTTTGAAATGGTCGACGTCCAGCATCAACACGGCCATGAATGTACCCGCATCCCTGCA > 3:249087/1‑137 CGCAGGCTGGCACTGATCGCTGCACCGATGCGCTGCAGCACCTGGTCGCCTGCGGCATGCCCGAACGTGTCGTTGATCTGTTTGAAATGGTCGACGTCCAGCATCAACACGGCCATGAATGTACCCGCATCCCTGCA < 4:249087/137‑1 GCTGGCACTGATCGCTGCACCGATGCGCTGCAGCACCTGGTCGCCTGCGGCATGCCCGAACGTGTCGTTGATCTGTTTGAAATGGTCGACGTCCAGCATCAACACGGCCAGGAATGTACCCGCAGCCCTGCACCGGCCGTGCTGCGCC > 4:197171/1‑148 GAACTGACCGGCCTGAACAACCGACGTGCTTTTTTCGACAATGCTTCGGCGCAGCACGTCCGGTGCAGGGATGCGGGTACATTCATGGCCGTGTTGATGCTGGACGTCGACCATTTCAAACAGATCAACGACACGTTCGGGCATGCCGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3785451‑3785603‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaggcTGGCACTGATCGCTGCACCGATGCGCTGCAGCACCTGGTCGCCTGCGGCATGCCCGAACGTGTCGTTGATCTGTTTGAAATGGTCGACGTCCAGCATCAACACGGCCATGAATGTACCCGCATCCCTGCACCGGACGTGCTGCGCC < NC_002947/3785643‑3785498 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |