| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3989295 | 40 (0.950) | 5 (0.120) | 5/246 | NT | 12.3% | coding (1813/2085 nt) | oplA | 5‑oxoprolinase A |
| ? | NC_002947 | = 3989343 | 33 (0.820) | coding (1861/2085 nt) | oplA | 5‑oxoprolinase A | |||||
TTCATGAGTGCAGTGTGGACCTGCAGCAGCACAGCCTGGACGAGGCAGGGCTGGCCGCGCTGATCAGCCGCTTCCACAGCCGGCACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCCGGTGGAGCTGGTGAACCTGGAGTGCTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3989146‑3989295‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcggCCGGCCCCTGCAGCTCGGGTTGCGGCGGGCGTGGCAGGTGGCCGATCACCGAGC < NC_002947/3989343‑3989290 TTCATGAGTGCAGTGTGGACCTGCAGCAGCACAGCCTGGACGAGGCAGGGCTGGCCGCGCTGATCAGCCGCTTCCACAGCCGGCACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCCGGTGGAGCTGGTGAACCTGGAGTGCTCG > 1:236883/1‑149TTCATGAGTGCAGTGTGGACCTGCAGCAGCACAGCCTGGACGAGGCAGGGCTGGCCGCGCTGATCAGCCGCTTCCACAGCCGGCACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCCGGTGGAGCTGGTGAACCTGGAGTGCTCG < 5:48496/149‑1 GCCGCGCTGATCAGCCGCTTCCACAGCCGGCACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCCGGTGGAGCTGGTGAACCTGGAGTGCTCGGCCGGCCCCTGCAGCTCGGGTTGCGGCGGGCGTGGCAGGTGGCCGATCACCGA < 8:62797/149‑1 GCTGATCAGCCGCTTCCACAGCCGGCACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCCGGTGGAGCTGGTGAACCTGGAGTGCTCGGCCGGCCCCTGCAGCTCGGGTTGCGGCGGGCGTGGCAGGTGGCCGATCACCGAGC > 1:236781/1‑146 GCTGATCAGCCGCTTCCACAGCCGGCACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCCGGTGGAGCTGGTGAACCTGGAGTGCTCGGCCGGCCCCTGCAGCTCGGGTTGCGGCGGGCGTGGCAGGTGGCCGATCACCGAGC < 2:236781/146‑1 ACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCCGGTGGAGCTGGTGAACCTGGAGTGCTCGGCCGGCCCCTGCAGCTCGGGTTGCGGCGGGCGTGGCAGGTGGCCGATCACCGAG > 7:242076/1‑119 ACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCCGGTGGAGCTGGTGAACCTGGAGTGCTCGGCCGGCCCCTGCAGCTCGGGTTGCGGCGGGCGTGGCAGGTGGCCGATCACCGAG < 8:242076/119‑1 TTCATGAGTGCAGTGTGGACCTGCAGCAGCACAGCCTGGACGAGGCAGGGCTGGCCGCGCTGATCAGCCGCTTCCACAGCCGGCACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCCGGTGGAGCTGGTGAACCTGGAGTGCTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3989146‑3989295‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcggCCGGCCCCTGCAGCTCGGGTTGCGGCGGGCGTGGCAGGTGGCCGATCACCGAGC < NC_002947/3989343‑3989290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |