New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4243539 | 53 (1.260) | 3 (0.080) | 3/244 | NT | 5.4% | coding (199/708 nt) | PP_3720 | NAD(P)H quinone oxidoreductase |
? | NC_002947 | = 4243563 | 55 (1.380) | coding (175/708 nt) | PP_3720 | NAD(P)H quinone oxidoreductase |
ACCCGGTCGATCCAGCCCTTGAGCATGGCCGGGGCCGAGAACCAGAAGATCGGGAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4243385‑4243539 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgcGAGAACCCCGAGTACCTCGTGTATGCGCTGGAGCAGCGTCAGGGCGTCAAGCGCGGTGCCATTGC < NC_002947/4243563‑4243499 ACCCGGTCGATCCAGCTCTTGAGCATGGCCGGGGCCGAGAACCAGAAGATCGGGAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTC > 3:215807/1‑149 tccATCCAGCCCTTGAGCATGGCCGGGGCCGAGAACCAGAAGATCGGGAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGTCACCGCGCTTGTCGCCCTGACGCTGCTCCAGCGC < 5:120832/146‑1 AACCAGAAGATCGTGAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTAGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCGAGAACCCCGAGTACCTCGTGTATGCGCTGGA < 5:168263/148‑1 CCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCGAGAACCCCGAGTACCTCGTGTATGCGCTG > 1:168085/1‑108 CCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCGAGAACCCCGAGTACCTCGTGTATGCGCTG < 2:168085/108‑1 AGCGCGAGAACCCCGAGTACCTCGTGTATGCGCTGGAGCAGCGTCAGGGCGTCAAGCGCGGTGCCATTGC < 7:154943/70‑1 AGCGCGAGAACCCCGAGTACCTCGTGTATGCGCTGGAGCAGCGTCAGGGCGTCAAGCGCGGTGCCATTGC > 8:154943/1‑70 ACCCGGTCGATCCAGCCCTTGAGCATGGCCGGGGCCGAGAACCAGAAGATCGGGAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4243385‑4243539 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgcGAGAACCCCGAGTACCTCGTGTATGCGCTGGAGCAGCGTCAGGGCGTCAAGCGCGGTGCCATTGC < NC_002947/4243563‑4243499 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |