New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 424353953 (1.260)3 (0.080) 3/244 NT 5.4% coding (199/708 nt) PP_3720 NAD(P)H quinone oxidoreductase
?NC_002947 = 4243563 55 (1.380)coding (175/708 nt) PP_3720 NAD(P)H quinone oxidoreductase

TCGATCCAGCCCTTGAGCATGGCCGGGGCCGAGAACCAGAAGATCGGGAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCACGCAGGGCTGCC  >  NC_002947/4243391‑4243684
                                                                                                                                                     |                                                                                                                                                  
tccatccAGCCCTTGAGCATGGCCGGGGCCGAGAACCAGAAGATCGGGAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGTCACCGCGCTTGTCGCCCTGACGCTGCTCCAGCGC                                                                                                                                                    <  5:120832‑M1/146‑1 (MQ=255)
  gATCCAGCCCTTGAGCATGGCCGGGGCCGAGAACCAGAAGATCGGGAAGTTCAGCACCAGCAGCTCGGCCCACAACAGCTAGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCa                                                                                                                                                   >  7:173685/1‑148 (MQ=255)
      cAGCCCTTGAGCATGGCCGGGGCCGAGAACCAGAAGATCGGGAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATacac                                                                                                                                              <  2:113036/149‑1 (MQ=255)
          ccTTGAGCATGGCCGGGGCCGAGAACCAGAAGATCGGGAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAgg                                                                                                                                          <  3:62577/149‑1 (MQ=255)
                gCATGGCCGGGGCCAAGAACCAGAAGATCGGGAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTCCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCg                                                                                                                                    >  6:20170/1‑149 (MQ=255)
                 cATGGCCGGGGCCGAGAACCAGAAGATCGGGAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAgg                                                                                                                                          >  1:196208/1‑142 (MQ=255)
                 cATGGCCGGGGCCGAGAACCAGAAGATCGGGAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAgg                                                                                                                                          <  2:196208/142‑1 (MQ=255)
                       cGGGGCCGAGAACCAGAAGATCGGGAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTtct                                                                                                                             >  5:261289/1‑149 (MQ=255)
                                 aaCCAGAAGATCGTGAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTAGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCgagaaccccgagtacctcgtgtatgcgctgga                                                                                                                    <  5:168263‑M1/148‑33 (MQ=255)
                                   ccAGAAGATCGGGAAGTTCAGCACCATCATATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGAGCTTGACGACCTGAAGCTGCTCCAGCTCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTa                                                                                                                  >  5:118418/1‑148 (MQ=255)
                                    cAGAAGATCGGGAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTa                                                                                                                  >  3:225428/1‑147 (MQ=255)
                                      gaagaTCGGGAAGTTCAGCACCAGTAGATCGGCCCACAACAGCTTGTCCAGCTCGATGATGGATATCTGCGGCAATGGCACCGCGATTGACGCCATGACGCTGATCAAGCGCATACACGAGGTACTCGGGGTGATCGCGCTGGGTaaat                                                                                                               >  1:70224/1‑148 (MQ=255)
                                      gaagaTCGGGAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGt                                                                                                              >  6:6291/1‑149 (MQ=255)
                                      gaagaTCGGGAAGTTCAGCACCAGCAGATACCCCCACAACAGCTTGTCCAGCTCCTGCTGCATATCTGCGGCAATGGCACCGAGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGACGTATTCGGGGTTCTCGCCCTGGGTAAAGt                                                                                                              >  5:50864/1‑149 (MQ=255)
                                               gAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCAc                                                                                                     >  2:43699/1‑149 (MQ=255)
                                                 aGTTCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTg                                                                                                   <  6:261289/149‑1 (MQ=255)
                                                   ttCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGc                                                                                                 >  5:66220/1‑149 (MQ=255)
                                                    tCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGc                                                                                                 >  6:8616/1‑148 (MQ=255)
                                                           cagcagATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGt                                                                                         >  2:136092/1‑149 (MQ=255)
                                                                       ccACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCgagaaccccgagtacctcgtgtatgcgctg                                                                                                                      <  2:168085‑M1/108‑31 (MQ=255)
                                                                       ccACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCgagaaccccgagtacctcgtgtatgcgctg                                                                                                                      >  1:168085‑M1/1‑78 (MQ=255)
                                                                       ccACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATgg                                                                            >  8:55796/1‑149 (MQ=255)
                                                                         acaacaGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCg                                                                          <  7:50881/149‑1 (MQ=255)
                                                                              aGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACaa                                                                     <  2:70224/149‑1 (MQ=255)
                                                                                cTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGt                                                                   >  6:76363/1‑149 (MQ=255)
                                                                                   gTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCa                                                                 <  4:215807/148‑1 (MQ=255)
                                                                                      cAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGa                                                             >  3:134827/1‑149 (MQ=255)
                                                                                        gCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGAcc                                                           >  2:215863/1‑149 (MQ=255)
                                                                                              tgctgGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCAc                                                      >  7:181542/1‑149 (MQ=255)
                                                                                                ctgGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCAc                                                      <  5:76363/147‑1 (MQ=255)
                                                                                                ctgGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCt                                                    <  1:43699/149‑1 (MQ=255)
                                                                                                ctgGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCt                                                    <  5:8616/149‑1 (MQ=255)
                                                                                                ctgGAGATCTGCGGCAATGGCCCCGCGCTTGACGCCCAGACGCTGCTCCAGCGCAGACAGGAGGTCATCGGGGTTCTCGCGCTGGGTAAGGTCATAGGCACTGGCCACAGGGTTCCAGCCCAGTGCGTACAAGTCCCTGCCCTGCAGCt                                                    >  6:66345/1‑149 (MQ=255)
                                                                                                 tgGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCtg                                                   >  1:124300/1‑149 (MQ=255)
                                                                                                   gATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCtga                                                  <  2:124300/148‑1 (MQ=255)
                                                                                                   gATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCtga                                                  <  8:140224/148‑1 (MQ=255)
                                                                                                   gATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCtg                                                   <  8:181542/147‑1 (MQ=255)
                                                                                                        cTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCt                                            >  8:207569/1‑149 (MQ=255)
                                                                                                         tGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTg                                          >  2:80943/1‑149 (MQ=255)
                                                                                                         tGCGGCAATGGCACCGCGCTTGACGCACTGACGCTGCTCCAGCGCATACACGACGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCAGCACCTGATGACCtt                                           >  2:253205/1‑149 (MQ=255)
                                                                                                          gCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGAACTCGTCGTTCTCGCGCTGGGTAAAGTCATCGGCAATGGCCACCGGGTTCCAGACCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTg                                          >  7:113951/1‑149 (MQ=255)
                                                                                                             gCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCgcgct                                                                                                                       >  8:154943‑M2/1‑65 (MQ=255)
                                                                                                             gCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCgcgct                                                                                                                       <  7:154943‑M2/70‑6 (MQ=255)
                                                                                                             gCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTggg                                        >  5:269285/1‑148 (MQ=255)
                                                                                                                       cgcgCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGtt                             >  1:107380/1‑149 (MQ=255)
                                                                                                                          gcTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACATGCACCTGATGACCTTGGGCACGGAAGGTTTc                           >  4:153088/1‑148 (MQ=255)
                                                                                                                              gACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGt                                                                   >  7:218067/1‑104 (MQ=255)
                                                                                                                              gACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGt                                                                   <  8:218067/104‑1 (MQ=255)
                                                                                                                              gACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCcaca                       <  2:39917/148‑1 (MQ=255)
                                                                                                                              gACGCCCTGACGCTGCTCCAGCCCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTAACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAg                      >  7:18355/1‑149 (MQ=255)
                                                                                                                                    cTGACTCTTCTCCAGCGCATTCACGATGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGAACTTGGGCACGGAAGGTTTCCACAGCCTGGt                <  6:118418/149‑1 (MQ=255)
                                                                                                                                    cTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAATGTTTCCACAGCCTGGt                <  8:173685/149‑1 (MQ=255)
                                                                                                                                      gACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCa              >  8:107231/1‑149 (MQ=255)
                                                                                                                                       aCGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCAc             <  5:6291/149‑1 (MQ=255)
                                                                                                                                       aCGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCAGCCCATGTTCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCa              <  1:80943/148‑1 (MQ=255)
                                                                                                                                         gctgctCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCACg            >  6:251139/1‑148 (MQ=255)
                                                                                                                                         gctgctCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCACGc           <  4:134827/149‑1 (MQ=255)
                                                                                                                                           tgctCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCAt                                                                                                           >  1:230354/1‑52 (MQ=255)
                                                                                                                                           tgctCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCAt                                                                                                           <  2:230354/52‑1 (MQ=255)
                                                                                                                                             ctCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCACGCAgg        <  7:107231/148‑1 (MQ=255)
                                                                                                                                              tCCAGCGCATACACGAGGTACTCGGGGTTCTCgcgctggagcagcgtcagggcgtcaagcgcggtgccattgccgcagatatccagcaggagctggactagctgttgtgggccgatctgctggtgctgaacttcacgatcttctggtt        <  5:168263‑M2/148‑117 (MQ=255)
                                                                                                                                                cAGCGCATACACGAGGTACTCGGGGTTCTCgcgctggagcagcgtcagggcgtcaagcgcggtgccattgccgcagatatccagcaggagctggacaagctgttgtgg                                              <  2:168085‑M2/108‑79 (MQ=255)
                                                                                                                                                cAGCGCATACACGAGGTACTCGGGGTTCTCgcgctggagcagcgtcagggcgtcaagcgcggtgccattgccgcagatatccagcaggagctggacaagctgttgtgg                                              >  1:168085‑M2/1‑30 (MQ=255)
                                                                                                                                                 aGCGCgagaaccccgagtacctcgtgtatgcgctggagcagcgtcagggcgtcaagcgcggtgccattgc                                                                                   <  7:154943‑M1/70‑66 (MQ=255)
                                                                                                                                                 aGCGCgagaaccccgagtacctcgtgtatgcgctggagcagcgtcagggcgtcaagcgcggtgccattgc                                                                                   >  8:154943‑M1/1‑5 (MQ=255)
                                                                                                                                                  gcgcATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCACGCAGGGCTGcc  <  5:20170/149‑1 (MQ=255)
                                                                                                                                                  gcgcATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCACGCAGGGCTGcc  <  4:225428/149‑1 (MQ=255)
                                                                                                                                                    gcATACACGAGGTACTCGTGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTc               <  8:96083/134‑1 (MQ=255)
                                                                                                                                                    gcATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTc               >  7:96083/1‑134 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
TCGATCCAGCCCTTGAGCATGGCCGGGGCCGAGAACCAGAAGATCGGGAAGTTCAGCACCAGCAGATCGGCCCACAACAGCTTGTCCAGCTCCTGCTGGATATCTGCGGCAATGGCACCGCGCTTGACGCCCTGACGCTGCTCCAGCGCATACACGAGGTACTCGGGGTTCTCGCGCTGGGTAAAGTCATCGGCACTGGCCACCGGGTTCCAGCCCATGGCGTACAAGTCACTGACCTGCACCTGATGACCTTGGGCACGGAAGGTTTCCACAGCCTGGTCACGCAGGGCTGCC  >  NC_002947/4243391‑4243684

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.