New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4351863 = | 42 (0.990) | 3 (0.070) | 3/250 | NT | 7.6% | coding (342/381 nt) | PP_3824 | hypothetical protein |
? | NC_002947 | 4351938 = | 32 (0.780) | coding (267/381 nt) | PP_3824 | hypothetical protein |
GTGGATATCGACAAGCGCGGCAGCGGCAGCAGCATCAAACTGCACGAGCGGCTGAATAACTTCCCGCTGCGCCTTGGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4351943‑4351863 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatATCCACCAGCGCCGCTGGGCCGGCACCTGAGGTGATTTTCTGCGGTACGATCAGCCGCAGGCCGTCGCCACGCTGCTCTTCGGTCAGCGGGTCACGCGTATCGGCAAGCTTCTCCTTTACGCAGTCGGCATAGGCGCGTGGGCTC > NC_002947/4351938‑4352082 GTGGATATCGACAAGCGCGGCAGCGGCAGCAGCATCAAACTGCACGAGCGGCTGAATAACTTCCCGCTGCGCCTTGGCGATATCCACCAGCGCCGCTGGGCCGGCAACTGAGGTGATTTTCTGCGGTACGATCAGCCGCAGGCCGTCGa > 4:18322/1‑148 CGACAAGCGCGGCAGCGGCAGCAGCATCAAACTGCACGAGCGGCTGAATAACTTCCCGCTGCGCCTTGGCGATATCCACCAGCGCCGCTGGGCCGGCACCTGAGGTGATTTTCTGCGGTACGATCAGCCGCAGGCCGTCGCCACGCTGC > 8:178118/1‑149 CAAGCGCGGCAGCGGCAGCAGCATCAAACTGCACGAGCGGCTGAATAACTTCCCGCTGCGCCTTGGCGATATCCACCAGCGCCGCTGGGCCGGCACCTGAGGTGATTTTCTGCGGTACGATCAGCCGCAGGCCGTCGCCACGCTGCTCT > 3:99275/1‑149 GATATCCACCAGCGCCGCTGGGCCGGCACCTGAGGTGATTTTCTGCGGTACGATCAGCCGCAGGCCGTCGCCACGCTGCTCTTCGGTCAGCGGGTCACGCGTATCGGCAAGCTTCTCCTTTACGCAGTCGGCATAGGCGCGTGGGCTC < 2:52585/148‑1 GATATCCACCAGCGCCGCTGGGCCGGCACCTGAGGTGATTTTCTGCGGTACGATCAGCCGCAGGCCGTCGCCACGCTGCTCTTCGGTCAGCGGGTCACGCGTATCGGCAAGCTTCTCCTTTACGCAGTCGGCATAGGCGCGTGGGCTC < 4:97728/148‑1 GTGGATATCGACAAGCGCGGCAGCGGCAGCAGCATCAAACTGCACGAGCGGCTGAATAACTTCCCGCTGCGCCTTGGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4351943‑4351863 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatATCCACCAGCGCCGCTGGGCCGGCACCTGAGGTGATTTTCTGCGGTACGATCAGCCGCAGGCCGTCGCCACGCTGCTCTTCGGTCAGCGGGTCACGCGTATCGGCAAGCTTCTCCTTTACGCAGTCGGCATAGGCGCGTGGGCTC > NC_002947/4351938‑4352082 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |