New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4501809 =	42 (0.990)	4 (0.100)	4/244	NT	9.4%	coding (273/672 nt)	yccA	FtsH‑mediated proteolysis substrate/modulator
	?	NC_002947	4501859 =	37 (0.930)					coding (323/672 nt)	yccA	FtsH‑mediated proteolysis substrate/modulator

ATGAAGCCACTCAGGAAGCTCATGTCCTTGCGGGTGATCAGCACGTAGGCCGACAGACCACCAAACACCAGCGCAGTCATGGCAAACGCGGAGCTCACTACCTCGGCGCCACCGGCCATGCCCAGGTAACGGTTGAGGATCGGGCCGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4501958‑4501809 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaggTAGTGAGCTCCGCGTTTGCCATGACTGCGCTGGTGTTTGGTGGTCTGTCGGCCTACGTGCTGATCACCCGCAAGGACATGAGCTTCCTGAGTGGCTTCATCACTGCGGGCTTCTTCGTTCTGCTGGGTGCTGTCGTTGCCAGCTTC  >  NC_002947/4501859‑4502004                                                                                                                                                                                                                                                                                                          ATGAAGCCACTCAGGAAGCTCATGTCCTTGCGGGTGATCAGCACGTAGGCCGACAGACCACCAAACACCAGCGCAGTCATGGCAAACGCGGAGCTCACTACCTCGGCGCTACCGGCCATGCCCAGGTAACGGTTGAGGATCGGGCCGAG                                                                                                                                                     <  5:97453/149‑1                                                                                                CACTACCTCGGCGCCACCGGCCATGCCCAGGTAACGGTTGAGGATCGGGCCGAGGTAGTGAGCTCCGCGTTTGCCATGACTGCGCTGGTGTTTGGTGGTCTGTCGGCCTACGTGCTGATCACCCGCAAGGACATGAGCTTCCTGAGTGG                                                      >  4:23998/1‑149                                                                                                  CTACCTCGGCGCCACCGGCCATGCCCAGGTAACGGTTGAGGATCGGGCCGAGGTAGTGAGCTCCGCGTTTGCCATGACTGCGCTGGTGTTTGGTGGTCTGTCGGCCTACGTGCTGATCACCCGCAAGGACATGAGCTTCCTGAGTGGCT                                                    >  6:71270/1‑149                                                                                                   TACCTCGGCGCCACCGGCCATGCCCAGGTAACGGTTGAGGATCGGGCCGAGGTAGTGAGCTCCGCGTGTTCCATGACTGAGCTGGTGTTTGGTGGTCTGTAGGCCTACGTGCTGATCACCCGCAAGTACATTAGCTTCCTGAGTGGCTT                                                   >  2:154007/1‑149                                                                                                              CACCGGCCATGCCCAGGTAACGGTTGAGGATCGGGCCGAGGTAGTGAGCTCCGCGTTTGCCATGACTGCGCTGGTGTTTGGTGGTCTGTCGGCCTACGTGCTGATCACCCGCAAGGACATGAGCTTCCTGAGTGGCTTCATCACTGCGG                                        <  5:71270/149‑1                                                                                                                                           ATCGGGCCGAGGTAGTGAGCTCCGCGTTTGCCATGACTGCGCTGGTGTTTGGTGGTCTGTCGGCCTACGTGCTGATCACCCGCAAGGACATGAGCTTCCTGAGTGGCTTCATCACTGCGGGCTTCTTCGTTCTGCTGGGCGCTGTCGTT           <  3:23998/149‑1                                                                                                                                                    AGGTAGTGAGCTCCGCGTTTGCCATGACTGCGCTGGTGTTTGGTGGTCTGTCGGCCTAAGTGCTGATCACCCGCAAGGACATGATCTTCCTGAGTGGCTTCATCACTGCGGGCTTATACGTTATGATGGCTGCTCTCGTTGCCAGCTTC  >  5:206352/1‑149                                                                                                                                                                                                                                                                                                          ATGAAGCCACTCAGGAAGCTCATGTCCTTGCGGGTGATCAGCACGTAGGCCGACAGACCACCAAACACCAGCGCAGTCATGGCAAACGCGGAGCTCACTACCTCGGCGCCACCGGCCATGCCCAGGTAACGGTTGAGGATCGGGCCGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4501958‑4501809 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaggTAGTGAGCTCCGCGTTTGCCATGACTGCGCTGGTGTTTGGTGGTCTGTCGGCCTACGTGCTGATCACCCGCAAGGACATGAGCTTCCTGAGTGGCTTCATCACTGCGGGCTTCTTCGTTCTGCTGGGTGCTGTCGTTGCCAGCTTC  >  NC_002947/4501859‑4502004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.