New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4520698	51 (1.210)	3 (0.070)	3/246	NT	6.1%	coding (1040/1257 nt)	icd	NADP(+)‑specific isocitrate dehydrogenase
	?	NC_002947	= 4520766	44 (1.090)					coding (972/1257 nt)	icd	NADP(+)‑specific isocitrate dehydrogenase

ATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATCAGGTCGGCGGCCTCGGTCCACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4520546‑4520698 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcatTGCCCCGGGCGCCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAAGTATGCCGGGCA  <  NC_002947/4520766‑4520689                                                                                                                                                                                                                                         ATCGCTCGAAATCGTAGGTCACGGTCTAGGCCACAATGGCGCCAATGGAGCCCATGATCAACACGTCGGCGGCCTCGGTCGACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGACCCCGGGATGACAATGTCCAGCCCc                                                                                    >  4:41199/1‑148                                                                          CTCGGTCCACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCATTGCCCCGGGCGCCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAAGTA           >  6:39314/1‑149                                                                                 CACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCATTGCCCCGGGCGCCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAAGTATGCCGGG    <  5:39314/149‑1                                                                                   CCCCATGTGGCGCAGCAGCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCATTGCCCCGGGCGCCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAAGTATGCCGGGCA  <  4:68614/149‑1                                                                                                                                                      GCATTGCCCCGGGCGCCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAAGTATGCCGGG    <  1:65446/80‑1                                                                                                                                                      GCATTGCCCCGGGCGCCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAAGTATGCCGGG    >  2:65446/1‑80                                                                                                                                                                                                                                         ATCGCTCGAAATCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATCAGGTCGGCGGCCTCGGTCCACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4520546‑4520698 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcatTGCCCCGGGCGCCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAAGTATGCCGGGCA  <  NC_002947/4520766‑4520689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.