| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4522668 | 34 (0.810) | 3 (0.080) | 3/244 | NT | 7.7% | coding (517/2226 nt) | idh | isocitrate dehydrogenase |
| ? | NC_002947 | = 4522689 | 40 (1.000) | coding (538/2226 nt) | idh | isocitrate dehydrogenase | |||||
TCCCGCGCCCGCTACGACCGCATCAAGGGCTCCGCCGTGAACCCGGTGCTGCGCGAAGGCAACTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4522518‑4522668‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagtcgcCCTGGGTCATGTGGGCAACGTGCGACTTGGAGTCAGCGGCCCAGGCGCCCATCTTGTGTGGGTGCTTGCGGGCGTAGTTCTTGACCGACAGCGGCGCGCGGCGGTCGGAGTTGCCTTCGCGCAGCACCGGGTTCACGGCGGAGCC < NC_002947/4522689‑4522545 TCCCGCGCCCGCTACGACCGCATCAAGGGCTCCGCCGTGAACCCGGTGCTGCGCGAAGGCAACTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTC < 4:135023/149‑1TCCCGCGCCCGCTACGACCGCATCAAGGGCTCCGCCGTGAACCCGGTGCTGCGCGAAGGCAACTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTC > 4:197900/1‑149 CGCCGTGAACCCGGTGCTGCGCGAAGGCAACTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGCCCTGGGTCATGTGGGCAACGTGCGACTTGG < 1:111714/149‑1 CTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC < 1:89120/89‑1 CTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC > 2:89120/1‑89 GCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGCCCTGGGTCATGTGGGCAACGTGCGACTTG > 3:53520/1‑107 GCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGCCCTGGGTCATGTGGGCAACGTGCGACTTG < 4:53520/107‑1 TCGCCCTGGGTCATGTGGGCAACGTGCGACTTGGAGTCAGCGGCCCAGGCGCCCATCTTGTGTGGGTGCTTGCGGGCGTAGTTCTTGACCGACAGCGGCGCGCGGCGGTCGGAGTTGCCTTCGCGCAGCACCGGGTTCACGGCGGAGCC > 4:117784/1‑149 TCCCGCGCCCGCTACGACCGCATCAAGGGCTCCGCCGTGAACCCGGTGCTGCGCGAAGGCAACTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4522518‑4522668‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagtcgcCCTGGGTCATGTGGGCAACGTGCGACTTGGAGTCAGCGGCCCAGGCGCCCATCTTGTGTGGGTGCTTGCGGGCGTAGTTCTTGACCGACAGCGGCGCGCGGCGGTCGGAGTTGCCTTCGCGCAGCACCGGGTTCACGGCGGAGCC < NC_002947/4522689‑4522545 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |