| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4522668 | 34 (0.810) | 3 (0.080) | 3/244 | NT | 7.7% | coding (517/2226 nt) | idh | isocitrate dehydrogenase |
| ? | NC_002947 | = 4522689 | 40 (1.000) | coding (538/2226 nt) | idh | isocitrate dehydrogenase | |||||
GGCTCCGCCGTGAACCCGGTGCTGCGCGAAGGCAACTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAGCCGCCGAAGTCATCGACTGCGCCACCATGAG > NC_002947/4522545‑4522837 | ggCTCCGCCGTGAACCCGGTGCTGCGCGAAGGCAACTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGgcga > 4:117784‑M2/1‑145 (MQ=255) ccgccgTGAACCCGGTGCTGCGCGAAGGCAACTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTc < 1:258465/149‑1 (MQ=255) cccGGTGCTGCGCGAAGGCAACTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGc > 5:244646/1‑148 (MQ=255) ccGGTGCTGCGCGAAGGCAACTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCg > 4:76279/1‑148 (MQ=255) ccGGTGCTGCGCGAAGGCAACTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCg > 6:149464/1‑148 (MQ=255) aaGGCAACTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACt > 2:82634/1‑148 (MQ=255) gCAACTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATc < 5:56683/149‑1 (MQ=255) aaCTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCa > 8:234397/1‑127 (MQ=255) aaCTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCa < 7:234397/127‑1 (MQ=255) aCTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGaa < 6:244646/149‑1 (MQ=255) cgccgcGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTgacga < 1:82634/149‑1 (MQ=255) ccgcGCGCCGCTGTCGGTCTAGAACTACGCCCGCAAGCACCCACACAAGATTGGCGGCTGTGCCGCTGACTCCAAGTCGC‑TCGTTGCCCACATGACCC‑AGGGCGACTTCTACTGCAGAGAAAAAGCCGCACTTATCGATGCTGACGACa < 6:129268/149‑1 (MQ=255) aaGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGt > 6:154062/1‑149 (MQ=255) aGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTc < 5:154062/149‑1 (MQ=255) aaCTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCgg > 3:5768/1‑149 (MQ=255) tACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGGGACTACTACAGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCa > 1:86348/1‑148 (MQ=255) cacaAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGCGACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTgc > 1:48483/1‑113 (MQ=255) cacaAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTgc < 2:48483/112‑1 (MQ=255) acaAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTgc > 3:159079/1‑111 (MQ=255) acaAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTgc < 4:159079/111‑1 (MQ=255) tGGGCGCCTGTGCAGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTgaaa < 6:184703/149‑1 (MQ=255) tGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTgaaa < 2:125198/149‑1 (MQ=255) ggCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTgaaaga < 2:135185/149‑1 (MQ=255) ccTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACCGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTgaaagaa > 4:165555/1‑146 (MQ=255) gggCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCATGCTGAAAGAAAAGAcc > 7:26071/1‑149 (MQ=255) ggCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGAccg < 3:76279/149‑1 (MQ=255) ccGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATc > 3:32656/1‑98 (MQ=255) ccGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATc < 4:32656/98‑1 (MQ=255) cTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTgaaaga > 3:205733/1‑136 (MQ=255) cTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTgaaaga < 4:205733/136‑1 (MQ=255) ccAAGTCGC‑ACGTTGCCCACATGACCC‑AGGgcgacttggagtcagcggcccaggcgcccatcttgtgtgggtgcttgcgggcgtagttcttgaccgacagcggcgcgcggcggtcggagttgccttcgcgcagcaccgggttcacggcg < 1:111714‑M2/149‑120 (MQ=255) cAAGTCGC‑ACGTTGCCCACATGACCCGAGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAgcc > 1:3810/1‑149 (MQ=255) cAAGTCGC‑ACGTTGCCCACATGACCC‑AGGgcgacttggagtcagcggcccaggcgcccatcttgtgtgggtgcttgcgggcgtagttcttgaccgacagcggcgcgc < 4:53520‑M2/107‑79 (MQ=255) cAAGTCGC‑ACGTTGCCCACATGACCC‑AGGgcgacttggagtcagcggcccaggcgcccatcttgtgtgggtgcttgcgggcgtagttcttgaccgacagcggcgcgc > 3:53520‑M2/1‑29 (MQ=255) cAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTTATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAgccg < 6:40028/149‑1 (MQ=255) cAAGTCGC‑ACGTTCCCCACATGACCC‑ATGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACATCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAgcc < 3:197900/148‑1 (MQ=255) gTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAGccgccg < 7:116960/149‑1 (MQ=255) tCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAGccgccg > 1:270142/1‑148 (MQ=255) gC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAGCCGCCGaa < 2:3810/148‑1 (MQ=255) gC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAGCCGCCGaa < 2:270142/148‑1 (MQ=255) gC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAGCCGCCGAAg > 5:23281/1‑149 (MQ=255) gTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAGCCGCCGAAGTCAt < 5:149464/149‑1 (MQ=255) ccACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAGCCGCCGAAGTCATCGaat > 8:38224/1‑147 (MQ=255) ccACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAGCCGCCGAAGTCATCGACt > 4:91320/1‑149 (MQ=255) cacaTGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAGCCGCCGAAGTCATCGACTg > 5:203102/1‑149 (MQ=255) cc‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAGCCGCCGAAGTCATCGACTGCGccacca > 2:134572/1‑149 (MQ=255) aGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAGCCGCCGAAGTCATCGACTGCGCCACCAt > 1:204192/1‑148 (MQ=255) ggCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAGCCGCCGAAGTCATCGACTGCGCCACCATGAg < 8:6054/149‑1 (MQ=255) ggCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAGCCGCCGAAGTCATCGACTGCGCCACCATGAg > 1:132933/1‑149 (MQ=255) | GGCTCCGCCGTGAACCCGGTGCTGCGCGAAGGCAACTCCGACCGCCGCGCGCCGCTGTCGGTCAAGAACTACGCCCGCAAGCACCCACACAAGATGGGCGCCTGGGCCGCTGACTCCAAGTCGC‑ACGTTGCCCACATGACCC‑AGGGCGACTTCTACGGCAGCGAAAAAGCCGCACTGATCGAAGCTGACGACAGCCTGCGCATCGAGCTGGTCGGCAAAGACGGCAGCACCACCGTGCTGAAAGAAAAGACCGCCGTCAAAGCCGCCGAAGTCATCGACTGCGCCACCATGAG > NC_002947/4522545‑4522837 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |