New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4766340 = | 44 (1.040) | 4 (0.100) | 4/248 | NT | 9.1% | coding (993/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA |
? | NC_002947 | 4766371 = | 38 (0.940) | coding (1024/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA |
TCGATGTCCTGGTAGCTCCAGTCGTAGCCCATATTGCGCGAACGCGAGTAGCCCACATGGCTGCCATCGCGGTTGACCGGCAGGCCACCCCAGTTGATGTTGTTGTTGTCGTTCTGGTTCGACGCGCCAACGGTCAGTGTGGTGTCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4766489‑4766340 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTGTTCGCCGAGGTC > NC_002947/4766371‑4766514 TCGATGTCCTGGTAGCTCCAGTCGTAGCCCATATTGCGCGAACGCGAGTAGCCCACATGGCTGCCATCGCGGTTGACCGGCAGGCCACCCCAGTTGATGTTGTTGTTGTCGTTCTGGTTCGACGCGCCAACGGTCAGTGTGGTGTCGT < 3:149604/148‑1 GATGTCCTGGTAGCTCCAGTCGTAGCCCATATTGCGCGAACGCGAGTAGCCCACATGGCTGCCATCGCGGTTGACCGGCAGGCCACCCCAGTTGATGTTGTTGTTGTCGTTCTGGTTCGACGCGCCAACGGTCAGTGTGGTGTCGTCG < 8:164579/148‑1 GGTTCGACGCGCCAACGGTCAGTGTGGTGTCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGA > 2:68490/1‑148 GTTCGACGCGCCAACGGTCAGTGTGGTGTCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGG > 5:59839/1‑136 GTTCGACGCGCCAACGGTCAGTGTGGTGTCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGG < 6:59839/136‑1 CGCGCCAACGGTCAGTGTGGTGTCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGAAGCCATGTGGGCTACTCGCGTTCGCGCAATATCGGCTACGACTGGAGCTACCAGGACAGCGct > 3:156043/1‑146 GTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTGTTCGCCGAGGTC > 1:58270/1‑148 TCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTG > 7:78878/1‑135 TCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTG < 8:78878/135‑1 TCGATGTCCTGGTAGCTCCAGTCGTAGCCCATATTGCGCGAACGCGAGTAGCCCACATGGCTGCCATCGCGGTTGACCGGCAGGCCACCCCAGTTGATGTTGTTGTTGTCGTTCTGGTTCGACGCGCCAACGGTCAGTGTGGTGTCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4766489‑4766340 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTGTTCGCCGAGGTC > NC_002947/4766371‑4766514 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |