New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4766340 =	44 (1.040)	4 (0.100)	4/248	NT	9.1%	coding (993/2439 nt)	fpvA	TonB‑dependent outer membrane ferripyoverdine receptor FpvA
	?	NC_002947	4766371 =	38 (0.940)					coding (1024/2439 nt)	fpvA	TonB‑dependent outer membrane ferripyoverdine receptor FpvA

CGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATC  >  NC_002947/4766193‑4766487                                                                                                                                                    |                                                                                                                                                    cggcgAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACcg                                                                                                                                                    >  3:183830/1‑149 (MQ=255)    gacctcggcgaacaccgtagtgttatcgatgtcctggtagctccagtcgtagcccatattgcgcgaacgcgagtagcccacatggctgccatcgcggttgaccggcaggccaccccagttgatgttgttgttgtcgttctggttcgac                                                                                                                                                  >  1:58270‑M1/145‑148 (MQ=255)     gAACTCGATCTCAGCGGCCCACTGAATGACCACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACcgacga                                                                                                                                                <  6:134409/149‑1 (MQ=255)        cTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGCCATCACCGAGTTCGACCTGACCGACGacac                                                                                                                                             <  1:23581/149‑1 (MQ=255)        cTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGCATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGacac                                                                                                                                             >  7:246946/1‑149 (MQ=255)         tCGATCTCAGCGGCCCACTGAATGACAACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGacac                                                                                                                                             >  4:195570/1‑148 (MQ=255)                caccgtagtgttatcgatgtcctggtagctccagtcgtagcccatattgcgcgaacgcgagtagcccacatggctgccatcgcggttgaccggcaggccaccccagttgatgttgttgttgtcgttctggttcga                                                                                                                                                   <  8:78878‑M1/3‑1 (MQ=255)                caccgtagtgttatcgatgtcctggtagctccagtcgtagcccatattgcgcgaacgcgagtagcccacatggctgccatcgcggttgaccggcaggccaccccagttgatgttgttgttgtcgttctggttcga                                                                                                                                                   >  7:78878‑M1/133‑135 (MQ=255)                 aGCGGCCCACTGAATGACAACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGa                                                                                                                                     <  4:183830/148‑1 (MQ=255)                       ccACTGAATGACAACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGacac                                                                                                                                             >  4:113628/1‑134 (MQ=255)                       ccACTGAATGACAACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGacac                                                                                                                                             <  3:113628/134‑1 (MQ=255)                           tGAATGACAACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGCACGCGGCCTGTTCTACGGCCTCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGcgcg                                                                                                                          >  6:130945/1‑149 (MQ=255)                            agcgctgtcctggtagctccagtcgtagccgatattgcgcgaacgcgagtagcccacatggcttccatcgcggttgaccggcaggccaccccagttgatgttgttgttgtcgttctggttCGACGACACCACACTGACCGTTGGcgcg                                                                                                                          >  3:156043‑M1/121‑148 (MQ=255)                             aaTGACAACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGt                                                                                                                         <  3:195570/148‑1 (MQ=255)                              aTGACAAAGGCAGCGTCCGTTGCCGATTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTAAGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTAGACCTGACCGACGACACCACACTGACCGTTGGCGCGTc                                                                                                                        <  8:105016/148‑1 (MQ=255)                                 aCAACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGaa                                                                                                                     <  1:33143/148‑1 (MQ=255)                                 aCAACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAAc                                                                                                                    >  2:50232/1‑149 (MQ=255)                                   tcctggtagctccagtcgtagcccatattgcgcgaacgcgagtagcccacatggctgccatcgcggttgaccggcaggccaccccagttgatgttgttgttgtcgttctggttCGACGACACCACACTGACCGTTGGCGCGTCGAAcc                                                                                                                   >  2:68490‑M1/114‑148 (MQ=255)                                        cAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACg                                                                                                             <  4:18721/149‑1 (MQ=255)                                              ccagtcgtagcccatattgcgcgaacgcgagtagcccacatggctgccatcgcggttgaccggcaggccaccccagttgatgttgttgttgtcgttctggttCGACGACACCACACTGACCGTTGGCGCGTCGAAc                                                                                                                    <  6:59839‑M1/34‑1 (MQ=255)                                              ccagtcgtagcccatattgcgcgaacgcgagtagcccacatggctgccatcgcggttgaccggcaggccaccccagttgatgttgttgttgtcgttctggttCGACGACACCACACTGACCGTTGGCGCGTCGAAc                                                                                                                    >  5:59839‑M1/103‑136 (MQ=255)                                                           gtcgGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTg                                                                                          >  6:39801/1‑149 (MQ=255)                                                            tcgCCGCCTTCAACTTCAAGGACAGGTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACTGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTg                                                                                          <  8:246946/148‑1 (MQ=255)                                                                    tACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCt                                                                                 >  5:174755/1‑149 (MQ=255)                                                                     aCAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTg                                                                                >  3:48012/1‑149 (MQ=255)                                                                       aaCGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGcc                                                                              >  4:128172/1‑149 (MQ=255)                                                                         cGACAAGGACAGCTCCCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCgg                                                                            <  6:147177/149‑1 (MQ=255)                                                                         cGACAAGGACAGCTCCCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCgg                                                                            <  6:143439/149‑1 (MQ=255)                                                                           aCAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTc                                                                          <  1:50232/149‑1 (MQ=255)                                                                                   aGCTACCAGGATTACGCCGGTCGCGAACGCGGCGTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACTCTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGa                                                                  <  7:247348/149‑1 (MQ=255)                                                                                     cTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGACGGTCAACCGCGATg                                                                >  5:200656/1‑149 (MQ=255)                                                                                      tACCAGGATTACGGCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATgg                                                               <  1:102585/149‑1 (MQ=255)                                                                                       aCCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACcgcg                                                                   <  2:248014/144‑1 (MQ=255)                                                                                       aCCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACcgcg                                                                   >  1:248014/1‑144 (MQ=255)                                                                                         cAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGAcc                                                                                                                                   >  1:17591/1‑78 (MQ=255)                                                                                         cAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGAcc                                                                                                                                   <  2:17591/78‑1 (MQ=255)                                                                                         cAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGAGGCCTGCCGGTCAACCGCGATGGCAg                                                            >  8:174169/1‑149 (MQ=255)                                                                                               tACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGCCGACACCACACTGACCGGTGGCGCGTCGAACCAGAACGCCAACAACCACAGCAACTGGGGTGGCCTGCCGGTCAACCGCGCTGGCAGCCAggt                                                      >  5:277297/1‑149 (MQ=255)                                                                                                            aaCGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGt                                         >  3:13020/1‑149 (MQ=255)                                                                                                               gcgGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGacaacaacaaca                                                                                                 <  4:244752/90‑1 (MQ=255)                                                                                                               gcgGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGacaacaacaaca                                                                                                 >  3:244752/1‑90 (MQ=255)                                                                                                                        tCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACAGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATg                             >  5:232077/1‑149 (MQ=255)                                                                                                                         cTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATg                             <  6:174755/148‑1 (MQ=255)                                                                                                                          tACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGACGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATggg                           <  6:200656/149‑1 (MQ=255)                                                                                                                            cGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATggg                           <  4:48012/147‑1 (MQ=255)                                                                                                                                     cGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACATCATCAACTGGGGTGGCCTGACGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGa                <  7:174169/149‑1 (MQ=255)                                                                                                                                     cGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGa                <  5:39801/149‑1 (MQ=255)                                                                                                                                       ttccgaaCCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGa                <  1:92296/141‑1 (MQ=255)                                                                                                                                       aGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGc              >  6:64062/1‑149 (MQ=255)                                                                                                                                        gTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGc              >  4:200809/1‑148 (MQ=255)                                                                                                                                           cGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTAc           <  6:232077/148‑1 (MQ=255)                                                                                                                                            gACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGAAATATGGGCTACGACTGGAGCTAc           >  8:60693/1‑147 (MQ=255)                                                                                                                                                 gACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGa                >  2:92296/1‑137 (MQ=255)                                                                                                                                                   ccGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACAt   <  3:200809/148‑1 (MQ=255)                                                                                                                                                    CGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATc  <  8:164579‑M1/148‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATC  >  NC_002947/4766193‑4766487

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.