New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4766340 =	44 (1.040)	4 (0.100)	4/248	NT	9.1%	coding (993/2439 nt)	fpvA	TonB‑dependent outer membrane ferripyoverdine receptor FpvA
	?	NC_002947	4766371 =	38 (0.940)					coding (1024/2439 nt)	fpvA	TonB‑dependent outer membrane ferripyoverdine receptor FpvA

ACAACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTGTTCGCCGAGGTC  >  NC_002947/4766225‑4766514                                                                                                                                                   |                                                                                                                                                 aCAACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGaa                                                                                                                                                 <  1:33143/148‑1 (MQ=255) aCAACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAAc                                                                                                                                                >  2:50232/1‑149 (MQ=255)   tcctggtagctccagtcgtagcccatattgcgcgaacgcgagtagcccacatggctgccatcgcggttgaccggcaggccaccccagttgatgttgttgttgtcgttctggttCGACGACACCACACTGACCGTTGGCGCGTCGAAcc                                                                                                                                               >  2:68490‑M1/114‑148 (MQ=255)        cAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACg                                                                                                                                         <  4:18721/149‑1 (MQ=255)              ccagtcgtagcccatattgcgcgaacgcgagtagcccacatggctgccatcgcggttgaccggcaggccaccccagttgatgttgttgttgtcgttctggttCGACGACACCACACTGACCGTTGGCGCGTCGAAc                                                                                                                                                >  5:59839‑M1/103‑136 (MQ=255)              ccagtcgtagcccatattgcgcgaacgcgagtagcccacatggctgccatcgcggttgaccggcaggccaccccagttgatgttgttgttgtcgttctggttCGACGACACCACACTGACCGTTGGCGCGTCGAAc                                                                                                                                                <  6:59839‑M1/34‑1 (MQ=255)                           gtcgGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTg                                                                                                                      >  6:39801/1‑149 (MQ=255)                            tcgCCGCCTTCAACTTCAAGGACAGGTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACTGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTg                                                                                                                      <  8:246946/148‑1 (MQ=255)                                    tACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑t                                                                                                            >  5:174755/1‑149 (MQ=255)                                     aCAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑Tg                                                                                                           >  3:48012/1‑149 (MQ=255)                                       aaCGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGcc                                                                                                         >  4:128172/1‑149 (MQ=255)                                         cGACAAGGACAGCTCCCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCgg                                                                                                       <  6:147177/149‑1 (MQ=255)                                         cGACAAGGACAGCTCCCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCgg                                                                                                       <  6:143439/149‑1 (MQ=255)                                           aCAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTc                                                                                                     <  1:50232/149‑1 (MQ=255)                                                   aGCTACCAGGATTACGCCGGTCGCGAACGCGGCGTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACTCTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGa                                                                                             <  7:247348/149‑1 (MQ=255)                                                     cTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGACGGTCAACCGCGATg                                                                                           >  5:200656/1‑149 (MQ=255)                                                      tACCAGGATTACGGCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATgg                                                                                          <  1:102585/149‑1 (MQ=255)                                                       aCCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACcgcg                                                                                              <  2:248014/144‑1 (MQ=255)                                                       aCCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACcgcg                                                                                              >  1:248014/1‑144 (MQ=255)                                                         cAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGAGGCC‑TGCCGGTCAACCGCGATGGCAg                                                                                       >  8:174169/1‑149 (MQ=255)                                                               tACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGCCGACACCACACTGACCGGTGGCGCGTCGAACCAGAACGCCAACAACCACAGCAACTGGGGTGGCC‑TGCCGGTCAACCGCGCTGGCAGCCAggt                                                                                 >  5:277297/1‑149 (MQ=255)                                                                            aaCGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGt                                                                    >  3:13020/1‑149 (MQ=255)                                                                               gcgGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGacaacaacaaca                                                                                                                             >  3:244752/1‑90 (MQ=255)                                                                               gcgGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGacaacaacaaca                                                                                                                             <  4:244752/90‑1 (MQ=255)                                                                                        tCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACAGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATg                                                        >  5:232077/1‑149 (MQ=255)                                                                                         cTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATg                                                        <  6:174755/148‑1 (MQ=255)                                                                                          tACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGACGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATggg                                                      <  6:200656/149‑1 (MQ=255)                                                                                            cGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATggg                                                      <  4:48012/147‑1 (MQ=255)                                                                                                     cGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACATCATCAACTGGGGTGGCC‑TGACGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGa                                           <  7:174169/149‑1 (MQ=255)                                                                                                     cGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGa                                           <  5:39801/149‑1 (MQ=255)                                                                                                       ttccgaaCCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGa                                           <  1:92296/141‑1 (MQ=255)                                                                                                       aGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGc                                         >  6:64062/1‑149 (MQ=255)                                                                                                        gTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGc                                         >  4:200809/1‑148 (MQ=255)                                                                                                           cGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTAc                                      <  6:232077/148‑1 (MQ=255)                                                                                                            gACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGAAATATGGGCTACGACTGGAGCTAc                                      >  8:60693/1‑147 (MQ=255)                                                                                                                ggttcgacgcgccaacggtcagtgtggtgtcgtcgAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGa                                 >  2:68490‑M2/36‑148 (MQ=255)                                                                                                                 gttcgacgcgccaacggtcagtgtggtgtcgtcgAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTgg                                            >  5:59839‑M2/35‑136 (MQ=255)                                                                                                                 gttcgacgcgccaacggtcagtgtggtgtcgtcgAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTgg                                            <  6:59839‑M2/102‑1 (MQ=255)                                                                                                                 gACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGa                                           >  2:92296/1‑137 (MQ=255)                                                                                                                   ccGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACAt                              <  3:200809/148‑1 (MQ=255)                                                                                                                    CGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATc                             <  8:164579‑M1/148‑1 (MQ=255)                                                                                                                      ACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGa                           <  3:149604‑M1/148‑1 (MQ=255)                                                                                                                       cgcgccaacggtcagtgtggtgtcgtcgAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGAAGCCATGTGGGCTACTCGCGTTCGCGCAATATCGGCTACGACTGGAGCTACCAGGACAgcgct                          >  3:156043‑M2/29‑146 (MQ=255)                                                                                                                              acacTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTAc                  >  3:26556/1‑149 (MQ=255)                                                                                                                                acTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACg                 <  2:226396/148‑1 (MQ=255)                                                                                                                                acTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACg                 >  1:226396/1‑148 (MQ=255)                                                                                                                                 cTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGgt               <  5:130945/149‑1 (MQ=255)                                                                                                                                   gACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCCGTGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGgtg              >  1:70805/1‑149 (MQ=255)                                                                                                                                      cGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTGTTCg          >  5:250588/1‑149 (MQ=255)                                                                                                                                         tGGCGCGTCGAACCAGAACGACCACAACAACCTCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTGTTCGCCg       <  6:277297/149‑1 (MQ=255)                                                                                                                                         tGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTGTTCGcc        >  4:250450/1‑148 (MQ=255)                                                                                                                                               gtcgAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTGTTCGCCGAGGTc  >  1:58270‑M2/5‑148 (MQ=255)                                                                                                                                                tcgAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGgtg              >  7:78878‑M2/4‑135 (MQ=255)                                                                                                                                                tcgAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGgtg              <  8:78878‑M2/132‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                 ACAACGGCAGCGTCCGTGGCCGCTTCGTCGGCGCCTACAACGACAAGGACAGCTACCAGGATTACGCCGGTCGCGAACGCGGCCTGTTCTACGGCATCACCGAGTTCGACCTGACCGACGACACCACACTGACCGTTGGCGCGTCGAACCAGAACGACAACAACAACATCAACTGGGGTGGCC‑TGCCGGTCAACCGCGATGGCAGCCATGTGGGCTACTCGCGTTCGCGCAATATGGGCTACGACTGGAGCTACCAGGACATCGATAACACTACGGTGTTCGCCGAGGTC  >  NC_002947/4766225‑4766514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.