New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4793328 | 44 (1.040) | 3 (0.070) | 3/246 | NT | 6.0% | coding (512/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
? | NC_002947 | = 4793364 | 52 (1.290) | coding (476/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
GCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4793177‑4793328 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgCCGGGCCGCTGATGCGGGTGCGCTTGCTGCGCACCTCGGCCACCGAGCACCTGTTGCTGATCACTCTGCACCATATCATCGCCGACGGCTGGTCGCTGGGTATCCTGATCGACGAACTGGTTCGGCTTTACGATGCCGCCGTGGCCG < NC_002947/4793364‑4793218 GCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAAAGTGATCAGCAACAGGTGCTCGGTGG < 7:225994/149‑1 GATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGGCGATCAGGATACCCAGCGACCCGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCACCAGGTGCTCGGTGGCC > 2:64271/1‑149 ATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCG < 1:139650/149‑1 GGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGCCGGGCCGCTGATGCGGGTGCGCTTGCTGCGCACCTCGG > 4:237924/1‑149 CGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGCCGGGCCGCTGATGCGGGTGCGCTTGCTGCGCACCTCGGCCACC < 3:237924/149‑1 GCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCCGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGCCGGGCCGCTGATGCGGGGGCGCTTGCTGCGCACCTCGGCCACCGA < 1:64271/149‑1 CGCCGGGCCGCTGATGCGGGTGCGCTTGCTGCGCACCTCGGCCACCGAGCACCTGTTGCTGATCACTCTGCACCATATCATCGCCGACGGCTGGTCGCTGGGTATCCTGATCGACGAACTGGTTCGGCTTTACGATGCCGCCGTGGCCG > 1:47089/1‑149 GCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4793177‑4793328 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgCCGGGCCGCTGATGCGGGTGCGCTTGCTGCGCACCTCGGCCACCGAGCACCTGTTGCTGATCACTCTGCACCATATCATCGCCGACGGCTGGTCGCTGGGTATCCTGATCGACGAACTGGTTCGGCTTTACGATGCCGCCGTGGCCG < NC_002947/4793364‑4793218 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |