New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5293930 =	34 (0.810)	3 (0.070)	3/246	NT	7.9%	coding (457/1527 nt)	mmsA‑II	methylmalonate‑semialdehyde dehydrogenase
	?	NC_002947	5293986 =	38 (0.940)					coding (401/1527 nt)	mmsA‑II	methylmalonate‑semialdehyde dehydrogenase

AATGGGCGAATTCGCCGAGAACGTCGCTGGCGGTGTCGATACCTACACCTTGCGCCAGCCGATCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5293997‑5293930 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcgAATTCGCCCATTTGCAGGGTGCCAATGGATGCAGCGTGCTCGACCACTTCCAGGCCGCGGAAGATATCGCCTTCAGCGTCGGCCAGGGTCTTGCCCTGCTCGGCGCTGAGCACCTGGGCAATGCGTTTGGTGTGTTCGCGGAT  >  NC_002947/5293986‑5294128                                                                                                                                                                                                                     AATGGGCGAATTCGCCGAGAACGTCGCTGGCGGTGTCGATACCTACACCTTGCGCCAGCCGATCGGCGAATTCGCCCATTTGCAGGGTGCCAATGGATGCAGCGTGCTCGACCACTTCCAGGCCGCGGAAGATATCGCCTTCAGCGTCG                                                                >  3:106762/1‑149              GCCGAGAACGTCGCTGGCGGTGTCGATACCTACACCTTGCGCCAGCCGATCGGCGAATTCGCCCATTTGCAGGGTGCCAATGGATGCAGCGTGCTCGACCACTTCCAGGCCGCGGAAGATATCGCCTTCAGCGTCGGCCAGGGTCTTGC                                                   >  5:26395/1‑149                          GCTGGCGGTGTCGATACCTACACCTTGCGCCAGCCGATCGGCGAATTCGCCCATTTGCAGGGTGCCAATGGATGCAGCGTGCTCGACCACTTCCAGGCCGCGGAAGATATCGCCTTCAGCGTCGGCCAGGGTCTTGCCCTGCTCGGCGC                                       <  6:26395/149‑1                                                               TCGGCGAATTCGCCCATTTGCAGGGTGCCAATGGATGCAGCGTGCTCGACCACTTCCAGGCCGCGGAAGATATCGCCTTCAGCGTCGGCCAGGGTCTTGCCCTGCTCGGCGCTGAGCACCTGGGCAATGCGTTTGGTGTGTTCGCGGAT  >  8:153954/1‑149                                                               TCGGCGAATTCGCCCATTTGCAGGGTGCCAATGGATGCAGCGTGCTCGACCACTTCCAGGCCGCGGAAGATATCGCCTTCAGCGTCGGCCAGGGTCTTGCCCTGCTCGGCGCTGAGCACCTGG                            >  1:207759/1‑123                                                               TCGGCGAATTCGCCCATTTGCAGGGTGCCAATGGATGCAGCGTGCTCGACCACTTCCAGGCCGCGGAAGATATCGCCTTCAGCGTCGGCCAGGGTCTTGCCCTGCTCGGCGCTGAGCACCTGG                            <  2:207759/123‑1                                                                    GAATTCGCCCATTTGCAGGGTGCCAATGGATGCAGCGTGCTCGACCACTTCCAGGCCGCGGAAGATATCGCCTTCAGCGTCGGCCAGGGTCTTGCCCTGCTCG                                           >  5:236571/1‑103                                                                    GAATTCGCCCATTTGCAGGGTGCCAATGGATGCAGCGTGCTCGACCACTTCCAGGCCGCGGAAGATATCGCCTTCAGCGTCGGCCAGGGTCTTGCCCTGCTCG                                           <  6:236571/103‑1                                                                                                                                                                                                                     AATGGGCGAATTCGCCGAGAACGTCGCTGGCGGTGTCGATACCTACACCTTGCGCCAGCCGATCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5293997‑5293930 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcgAATTCGCCCATTTGCAGGGTGCCAATGGATGCAGCGTGCTCGACCACTTCCAGGCCGCGGAAGATATCGCCTTCAGCGTCGGCCAGGGTCTTGCCCTGCTCGGCGCTGAGCACCTGGGCAATGCGTTTGGTGTGTTCGCGGAT  >  NC_002947/5293986‑5294128

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.