| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5593775 | 34 (0.810) | 3 (0.080) | 3/242 | NT | 8.6% | coding (279/1284 nt) | PP_4921 | NCS1 family transporter |
| ? | NC_002947 | = 5593800 | 32 (0.810) | coding (254/1284 nt) | PP_4921 | NCS1 family transporter | |||||
CACAGCGTCCAGAGCATGGGGCTGTTCCAGGCACTTTCCTCACCGAACGCTCGCGCACCCAGCAAGCTGGCAGCATCGCGCATGACGATAATCTCGAAAGCGCCCCAACCCACCAGTTGCAGCAAGTTGAGCAGCGCCGGCAAGCGCGCGCCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5593620‑5593775‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccatggGCACCCTGAAACTCAGCCTGGGCAGCCATGGCGCGCGCTTGCCGGCGCTGCTCAACTTGCTGCAACTGGTGGGTTGGGGCGCTTTCGAGATTATCGTCATGCGCGATGCTGCCAGCTTGCTGGGTGCGCGAGCGTTCGGTGAG < NC_002947/5593800‑5593658 CACAGCGTCCAGAGCATGGGGCTGTTCCAGGCACTTTCCTCACCGAACGCTCGCGCACCCAGCAAGCTGGCAGCATCGCGCATGACGATAATCTCGAAAGCGCCCCAACCCACCAGTTGCAGCAAGTTGAGCAGCGCCGGCAAGCGCGC > 8:38184/1‑149 GAACGCTCGCGCACCCAGCAAGCTGGCAGCATCGCGCATGACGATAATCTCGAAAGCGCCCCAACCCACCAGTTGCAGCAAGTTGAGCAGCGCCGGCAAGCGCGCGCCATGGGCACCCTGAAACTCAGCCTGGGCAGCCATGGCGCGCG < 7:38184/149‑1 GCTCGCGCACCCAGCAAGCTGGCAGCATCGCGCATGACGATAATCTCGAAAGCGCCCCAACCCACCAGTTGCAGCAAGTTGAGCAGCGCCGGCAAGCGCGCGCCATGGGCACCCTGAAACTCAGCCTGGGCAGCC > 7:184180/1‑135 GCTCGCGCACCCAGCAAGCTGGCAGCATCGCGCATGACGATAATCTCGAAAGCGCCCCAACCCACCAGTTGCAGCAAGTTGAGCAGCGCCGGCAAGCGCGCGCCATGGGCACCCTGAAACTCAGCCTGGGCAGCC < 8:184180/135‑1 CGCATGACGATAATCTCGAAAGCGCCCCAACCCACCAGTTGCAGCAAGTTGAGCAGCGCCGGCAAGCGCGCGCCAT > 3:118285/1‑76 CGCATGACGATAATCTCGAAAGCGCCCCAACCCACCAGTTGCAGCAAGTTGAGCAGCGCCGGCAAGCGCGCGCCAT < 4:118285/76‑1 CGCCATGGGCACCCTGAAACTCAGCCTGGGCAGCCATGGCGCGCGCTTGCCGGCGCTGCTCAACTTGCTGCAACTGGTGGGTTGGGGCGCTTTCGAGATTATCGTCATGCGCGATGCTGCCAGCTTGCTGGGTGCGCGAGCGTTCGGT < 2:125818/148‑1 GCCATGGGCACCCTGAAACTCAGCCTGGGCAGCCATGGCGCGCGCTTGCCGGCGCTGCTCAACTTGCTGCAACTGGTGGGTTGGGGCGCTTTCGAGATTATCGTCATGCGCGATGCTGCCAGCTTGCTGGGTGCGCGAGCGTTCGGTGA < 3:168336/149‑1 GCCATGGGCACCCTGAAACTCAGCCTGGGCAGCCATGGCGCGCGCTTGCCGGCGCTGCTCAACTTGCTGCAACTGGTGGGTTGGGGCGCTTTCGAGATTATCGTCATGCGCGATGCTGCCAGCTTGCTGGGTGCGCGAGCGTTCGGTGA < 3:171819/149‑1 CCATGGGCACCCTGAAACTCAGCCTGGGCAGCCATGGCGCGCGCTTGCCGGCGCTGCTCAACTTGCTGCAACTGGTGGGTTGGGGCGCTTTCGAGATTATCGTCATGCGCGATGCTGCCAGCTTGCTGGGTGCGCGAGCGTTCGGTGAG < 8:39976/149‑1 GGCACCCTGAAACTCAGCCTGGGCAGCCATGGCGCGCGCTTGCCGGCGCTGCTCAACTTGCTGCAACTGGTGGGTTGGGGCGCTTTCGAGATTATCGTCATGCGCGATGCTGCCAGCTTGCTGGGTGCGCGA < 7:28533/132‑1 GGCACCCTGAAACTCAGCCTGGGCAGCCATGGCGCGCGCTTGCCGGCGCTGCTCAACTTGCTGCAACTGGTGGGTTGGGGCGCTTTCGAGATTATCGTCATGCGCGATGCTGCCAGCTTGCTGGGTGCGCGA > 8:28533/1‑132 CACAGCGTCCAGAGCATGGGGCTGTTCCAGGCACTTTCCTCACCGAACGCTCGCGCACCCAGCAAGCTGGCAGCATCGCGCATGACGATAATCTCGAAAGCGCCCCAACCCACCAGTTGCAGCAAGTTGAGCAGCGCCGGCAAGCGCGCGCCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5593620‑5593775‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccatggGCACCCTGAAACTCAGCCTGGGCAGCCATGGCGCGCGCTTGCCGGCGCTGCTCAACTTGCTGCAACTGGTGGGTTGGGGCGCTTTCGAGATTATCGTCATGCGCGATGCTGCCAGCTTGCTGGGTGCGCGAGCGTTCGGTGAG < NC_002947/5593800‑5593658 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |