| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5817709 = | 57 (1.350) | 4 (0.100) | 3/238 | NT | 7.1% | coding (245/1011 nt) | pilT | twitching motility protein |
| ? | NC_002947 | 5817767 = | 52 (1.340) | coding (187/1011 nt) | pilT | twitching motility protein | |||||
TGCGCCTGGATGGCGAGTTGCAGCGTATGGGCTTGCCGCCGTTGAGCCAGGGTGCCTTGATCGAGGGCATGGCCAGCGTGCTGGATAACGATCAGCGCCGGCAGTGGGCCCAAGGCGATGAAATGGACCTTGCGCTGGAGTTGCCGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5817859‑5817709‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcgctGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCG > NC_002947/5817767‑5817857 TGCGCCTGGATGGCGAGTTGCAGCGTATGGGCTTGCCGCCGTTGAGCCAGGGTGCCTTGATCGAGGGCATGGCCAGCGTGCTGGATAACGATCAGCGCCGGCAGTGGGCCCAAGGCGATGAAATGGACCTTGCGCTGGAGTTGCCGGCG > 5:133277/1‑149 GCGCCGGCAGTGGGCCCAAGGCGATGAAATGGACCTTGCGCTGGAGTTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCCGGCG > 5:11237/1‑148 CGCCGGCAGTGGGCCCAAGGCGATGAAATGGACCTTGCGCTGGAGTTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCG > 1:238937/1‑147 CGCCGGCAGTGGGCCCAAGGCGATGAAATGGACCTTGCGCTGGAGTTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCG > 7:154738/1‑113 CGCCGGCAGTGGGCCCAAGGCGATGAAATGGACCTTGCGCTGGAGTTGCCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCG < 8:154738/113‑1 CCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCG < 7:157741/99‑1 CCGGCGCTGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCG > 8:157741/1‑99 TGCGCCTGGATGGCGAGTTGCAGCGTATGGGCTTGCCGCCGTTGAGCCAGGGTGCCTTGATCGAGGGCATGGCCAGCGTGCTGGATAACGATCAGCGCCGGCAGTGGGCCCAAGGCGATGAAATGGACCTTGCGCTGGAGTTGCCGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5817859‑5817709‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcgctGATCGTTATCCAGCACGCTGGCCATGCCCTCGATCAAGGCACCCTGGCTCAACGGCGGCAAGCCCATACGCTGCAACTCGCCATCCAGGCG > NC_002947/5817767‑5817857 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |