| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5830989 = | 45 (1.070) | 3 (0.080) | 3/242 | NT | 8.1% | coding (1155/1485 nt) | ftsY | signal recognition particle protein translocation receptor GTPase |
| ? | NC_002947 | 5831052 = | 26 (0.660) | coding (1092/1485 nt) | ftsY | signal recognition particle protein translocation receptor GTPase | |||||
TCGAGCAGTTGCAGGTGTGGGGCGAGCGTAACCAGATTCCGGTGATCGCCCAGCACACGGGCGCCGACTCTGCTTCGGTAATCTTCGATGCCGTGCAGGCCGCCAAGGCGCGTGGCGTCGACGTGCTGATCGCCGACACTGCCGGCCGCCTGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5831143‑5830989‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgcacGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGACCGCCGCTGCGCGGAAGGTATCACCGGCAGCCAGCATGACCTTCTTGCCTTCCA > NC_002947/5831052‑5831197 TCGAGCAGTTGCAGGTGTGGGGCGAGCGTAACCAGATTCCGGTGATCGCCCAGCACACGGGCGCCGACTCTGCTTCGGTAATCTTCGATGCCGTGCAGGCCGCCAAGGCGCGTGGCGTCGACGTGCTGATCGCCGACACTGCCGGCCGC < 7:43093/149‑1 AGCAGTTGCAGGTGTGGGGCGAGCGTAACCAGATTCCGGTGATCGCCCAGCACACGGGCGCCGACTCTGCTTCGGTAATCTTCGATGCCGTGCAGGCCGCCAAGGCGCGTGGCGTCGACGTGCTGATCGCCGACACTGCCGGCCGCCTG > 6:50769/1‑149 gAGTTGCAGGTTTGTGTCTCGCGTAACCTGATTCCGGTTATCGCCCAGCACACGGGCGCCGTCTCTGCTTCGGTAATCTTCGATGCCGTGCAGGGCGCCAAGGCGCGTGGCGTCGACGTGCTGATCGCGGACACTGCCGTCCGCCTGC < 8:157838/147‑1 CGTGCAGGCCGCCAAGGCGCGTGGCGTCGACGTGCTGATCGCCGACACTGCCGGCCGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTGCGCTCGCCCCACACCTGCAAC > 5:276640/1‑149 GCAGGCCGCCAAGGCGCGTGGCGTCGACGTGCTGATCGCCGACACTGCCGGCCGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACT < 5:151566/147‑1 GCAGGCCGCCAAGGCGCGTGGCGTCGACGTGCTGATCGCCGACACTGCCGGCCGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACT > 6:151566/1‑147 CTGCACGGCATCGACGATTACCGACGCAGAGTCGGCGCCCGTGGGCTGGGCGAGCACCGGAAGCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGACCGCCGCTGCGCGGAAGGTATCACCGGCAGCCAGCATGACCTTCTTGCCTT < 6:51201/149‑1 CACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGACCGCCGCTGCGCGGAAGGTATCACCGGCAGCCAGCATGACCTTCTTGCCTTCCA < 8:43093/149‑1 CACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGACCGCCGCTGCGCGGAAGGTATCACCGGCAGCCAGCATGACCTTCTTGCCTTC > 4:210660/1‑147 TCGAGCAGTTGCAGGTGTGGGGCGAGCGTAACCAGATTCCGGTGATCGCCCAGCACACGGGCGCCGACTCTGCTTCGGTAATCTTCGATGCCGTGCAGGCCGCCAAGGCGCGTGGCGTCGACGTGCTGATCGCCGACACTGCCGGCCGCCTGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5831143‑5830989‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgcacGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGACCGCCGCTGCGCGGAAGGTATCACCGGCAGCCAGCATGACCTTCTTGCCTTCCA > NC_002947/5831052‑5831197 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |