New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5830989 =	45 (1.070)	3 (0.080)	3/242	NT	8.1%	coding (1155/1485 nt)	ftsY	signal recognition particle protein translocation receptor GTPase
	?	NC_002947	5831052 =	26 (0.660)					coding (1092/1485 nt)	ftsY	signal recognition particle protein translocation receptor GTPase

GCAGCACCTCGTGCGGCGCCTCAACGTCGAGCTTGCCGATGACCCGGCGAACCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGACCGCCGCTGCGCGGAAGGTATCACCGGCAGCCAGCATGACCTTCTTGCCTTCCA  >  NC_002947/5830904‑5831197                                                                                                                                                     |                                                                                                                                                  gttgcaggtgtggggcgagcgcaaccagattccggtgatcgcccagcacacgggcgccgactctgcttcggtaatcttcgatgccGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACg                                                                                                                                                   >  5:276640‑M1/86‑149 (MQ=255) gcagcaCCTCGTGCGGCGCCTCAACGTCGAGCTTGCCGATGACCCGGCGAACCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACg                                                                                                                                                   >  1:39003/1‑149 (MQ=255) gcagcaCCTCGTGCGGCGCCTCAACGTCGAGCTTGCCGATGACCCGGCGAACCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACg                                                                                                                                                   <  6:236123/149‑1 (MQ=255)     caCCTCGTGCGGCGCCTCAACGTCGAGCTTGCCGATGACCCGGCGAACCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCAt                                                                                                                                               <  2:39003/149‑1 (MQ=255)        cTCGTGCGGCGCCTCAACGTCGAGCTTGCCGATGACCCGGCGAACCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGa                                                                                                                                            <  6:156498/149‑1 (MQ=255)           gTGCGGCGCCTCAACGTCGAGCTTGCCGATGACCCGGCGAACCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGa                                                                                                                                         <  4:177923/149‑1 (MQ=255)               ggcgCCTCAACGTCGAGCTTGCCGATGACCCGGCGAACCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTAc                                                                                                                                     <  6:42992/149‑1 (MQ=255)                gcgcCTCAACGTCGAGCTTGCCGATGACCCGGCGAACCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTAcc                                                                                                                                    >  7:19743/1‑149 (MQ=255)                       aaCGTCGAGCTTGCCGATGACCCGGCGAACCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAg                                                                                                                                >  7:62112/1‑146 (MQ=255)                       aaCGTCGAGCTTGCCGATGACCCGGCGAACCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGACCTGCACGGCATCGAAGATTACCGAAGc                                                                                                                               <  5:6743/147‑1 (MQ=255)                          gTCGAGCTTGCCGATGACCCGGCGAACCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTCGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGt                                                                                                                          >  5:125438/1‑149 (MQ=255)                          gTCGAGCTTGCCGATGACCCGGCGAACCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCAGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCaga                                                                                                                            <  6:145128/147‑1 (MQ=255)                          gTCGAGCTTGCCGATGACCCGGCGAACCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCAGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCaga                                                                                                                            >  5:145128/1‑147 (MQ=255)                           tCGAGCTTGCCGATGACCCGGCGAACCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTc                                                                                                                         <  8:62112/149‑1 (MQ=255)                                            ccGGCGAACCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTTTGCTggg                                                                                                        >  2:13136/1‑149 (MQ=255)                                             cGGCGAACCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTCGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGc                                                                                                       <  6:125438/149‑1 (MQ=255)                                                   aCCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCAc                                                                                                 <  3:38632/149‑1 (MQ=255)                                                    ccTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCg                                                                                                                                             <  2:249327/104‑1 (MQ=255)                                                    ccTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCg                                                                                                                                             >  1:249327/1‑104 (MQ=255)                                                             gCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTgg                                                                                       >  4:164906/1‑149 (MQ=255)                                                                 ttCGATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACTGCATCGAAGATTACCTAAGCAGAGTGGGCGCCCGTGTGCTGGGCTATCTCCTGAATCTGGtt                                                                                     <  4:187120/147‑1 (MQ=255)                                                                               cTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACAcc                                                                     >  5:50769/1‑149 (MQ=255)                                                                                     cgtgcaggccgccaaggcgcgtggcgtcgacgtgctgatcgccgacactgccggccgcctgcacGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTGCGCTCGCCCCACACCTGCAAc                                                               >  5:276640‑M2/65‑149 (MQ=255)                                                                                        gcaggccgccaaggcgcgtggcgtcgacgtgctgatcgccgacactgccggccgcctgcacGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACt                                                              >  6:151566‑M2/62‑147 (MQ=255)                                                                                        gcaggccgccaaggcgcgtggcgtcgacgtgctgatcgccgacactgccggccgcctgcacGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACt                                                              <  5:151566‑M2/86‑1 (MQ=255)                                                                                        GCAGGCGGACGGCAGTGTCCGCGATCAGCACGTCGACGCCACGCGCCTTGGCGCCCTGCACGGCATCGAAGATTACCGAAGCAGAGACGGCGCCCGTGTGCTGGGCGATAACCGGAATCAGGTTACGCGAGACACAAACCTGCAActc                                                             <  8:157838‑M1/148‑2 (MQ=255)                                                                                         CAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCt                                                           >  6:50769‑M1/1‑149 (MQ=255)                                                                                            GCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGa                                                        <  7:43093‑M1/149‑1 (MQ=255)                                                                                                  ggcAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGa                                                        >  8:190478/1‑143 (MQ=255)                                                                                                  ggcAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGa                                                        <  7:190478/143‑1 (MQ=255)                                                                                                                     aCGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGACCGCCGCTGCGCGGaa                                        <  1:53477/140‑1 (MQ=255)                                                                                                                     aCGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGACCGCCGCTGCGCGGaa                                        >  2:53477/1‑140 (MQ=255)                                                                                                                           aCGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGACCGCCGCTGCGCGGAAGGTATCACCGGcagc                         >  6:158260/1‑149 (MQ=255)                                                                                                                             gCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGACCGCCGCTGCGCGGAAGGTATCACCGGcagc                         >  8:147456/1‑147 (MQ=255)                                                                                                                                aCGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGACCGCCGCTGCGCGGAAGGTATCACCGGCAGCCAGCa                    <  1:13136/149‑1 (MQ=255)                                                                                                                                  gcgcCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGCTCACCGGAAGCGGGGTACGCGCGCCCCCCCCCTGCAACTGCTCGACCGCCGCTGCGCGGAAGGTATCCCCGGCAGCCCGCagg                  >  5:51201/1‑147 (MQ=255)                                                                                                                                          gcggcCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAAc                                                               >  6:18637/1‑96 (MQ=255)                                                                                                                                          gcggcCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAAc                                                               <  5:18637/96‑1 (MQ=255)                                                                                                                                          gcggcCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGaac                                                      >  1:190737/1‑103 (MQ=255)                                                                                                                                          gcggcCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGAcc                                                      <  2:190737/105‑1 (MQ=255)                                                                                                                                               ctgcacGGCATCGACGATTACCGACGCAGAGTCGGCGCCCGTGGGCTGGGCGAGCACCGGAAGCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGACCGCCGCTGCGCGGAAGGTATCACCGGCAGCCAGCATGACCTTCTTGCCtt     <  6:51201‑M2/143‑1 (MQ=255)                                                                                                                                                  cacGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGACCGCCGCTGCGCGGAAGGTATCACCGGCAGCCAGCATGACCTTCTTGCCTTc    >  4:210660‑M2/4‑147 (MQ=255)                                                                                                                                                  cacGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGACCGCCGCTGCGCGGAAGGTATCACCGGCAGCCAGCATGACCTTCTTGCCTTCCa  <  8:43093‑M2/146‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  GCAGCACCTCGTGCGGCGCCTCAACGTCGAGCTTGCCGATGACCCGGCGAACCTTCTTCAGCTCTTCCATCAGGTTGTCTTTGGTGTGCAGGCGGCCGGCAGTGTCGGCGATCAGCACGTCGACGCCACGCGCCTTGGCGGCCTGCACGGCATCGAAGATTACCGAAGCAGAGTCGGCGCCCGTGTGCTGGGCGATCACCGGAATCTGGTTACGCTCGCCCCACACCTGCAACTGCTCGACCGCCGCTGCGCGGAAGGTATCACCGGCAGCCAGCATGACCTTCTTGCCTTCCA  >  NC_002947/5830904‑5831197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.