| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5867208 = | 39 (0.920) | 5 (0.120) | 5/246 | NT | 11.9% | coding (498/972 nt) | thyA | thymidylate synthase |
| ? | NC_002947 | 5867248 = | 37 (0.920) | coding (458/972 nt) | thyA | thymidylate synthase | |||||
AAGCGCATCCCGCTGAGCAACCCGGCGGCCATCGAAATGGCCGAGCAAGCCGGTTTCCGCCGCATTGCCCAGGACGAAGAGGACGGCGTCGCGTTCGTCATCCTGTACAAGGCGATCGACCAGGTACGCCAGTGCCTGGACACCATCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5867357‑5867208‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgccTTGTACAGGATGACGAACGCGACGCCGTCCTCTTCGTCCTGGGCAATGCGGCGGAAACCGGCTTGCTCGGCCATTTCGATGGCCGCCGGGTTGCTCAGCGGGATGCGCTTGTAGCCCGGCCACTGGCGCCATTGCACACCATAGATC > NC_002947/5867248‑5867394 AAGCGCATCCCGCTGAGCAACCCGGCGGCCATCGAAATGGCCGAGCAAGCCGGTTTCCGCCGCATTGCCCAGGACGAAGAGGACGGCGTCGCGTTCGTCATCCTGTACAAGGCGATCGACCAGGTACGCCAGTGCCTGGACACCATCGC > 2:109781/1‑149AAGCGCATCCCGCTGAGCAACCCGGCGGCCATCGAAATGGCCGAGCAAGCCGGTTTCCGCCGCATTGCCCAGGACGAAGAGGACGGCGTCGCGTTCGTCATCCTGTACAAGGCGATCGACCAGGTACGCCAGTGCCTGGACACCATCGC > 7:144552/1‑149 AAGGCGATCGACCAGGTACGCCAGTGCCTGGACACCATCGCCTTGTACAGGATGACGAACGCGACGCCGTCCTCTTCGTCCTGGGCAATGCGGCGGAAACCGGCTTGCTCGGCCATTTCGATGGCCGCCGGGTTGCTCAGCGGGATGCG > 5:196652/1‑149 GGCGATCGACCAGGTACGCCAGTGCCTGGACACCATCGCCTTGTACAGGATGACGAACGCGACGCCGTCCTCTTCGTCCTGGGCAATGCGGCGGAAACCGGCTTGCTCGGCCATTTCGAT > 1:199696/1‑120 GGCGATCGACCAGGTACGCCAGTGCCTGGACACCATCGCCTTGTACAGGATGACGAACGCGACGCCGTCCTCTTCGTCCTGGGCAATGCGGCGGAAACCGGCTTGCTCGGCCATTTCGAT < 2:199696/120‑1 GCGATCGACCAGGTACGCCAGTGCCTGGACACCATCGCCTTGTACAGGATGACGAACGCGACGCCGTCCTCTTCGTCCTGGGCAATGCGGCGGAAACCGGCTTGCTCGGCCATTTCGATGGCCGCCGGGTTGCTCAGCGGGATGCGCTT < 6:196652/149‑1 GATCGACCAGGTACGCCAGTGCCTGG‑‑TCGATCGCCTTGTACAGGATGACGAACGCGACGCCGTCCTCTTCGTCCTGGGCAATGCGGCGGAAACCGGCTTGCTCGGCCATTTCGATGGCCGCCGGGTTGCTCAGCGGGATGCGCTTGTAG > 8:241424/1‑149 CGCCTTGTACAGGATGACGAACGCGACGCCGTCCTCTTCGTCCTGGGCAATGCGGCGGAAACCGGCTTGCTCGGCCATTTCGATGGCCGCCGGGTTGCTCAGCGGGATGCGCTTGTAGCCCGGCCACTGGCGCCATTGCACACCA > 4:103580/1‑145 GCCTTGTACAGGATGACGAACGCGACGCCGTCCTCTTCGTCCTGGGCAATGCGGCGGAAACCGGCTTGCTCGGCCATTTCGATGGCCGCCGGGTTGCTCAGCGGGATGCGCTTGTAGCCCGGCCACTGGCGCCATTGCACACCATAGAT < 4:40401/149‑1 CCTTGTACAGGATGACGAACGCGACGCCGTCCTCTTCGTCCTGGGCAATGCGGCGGAAACCGGCTTGCTCGGCCATTTCGATGGCCGCCGGGTTGCTCAGCGGGATGCGCTTGTAGCCCGGCCACTGGCGCCATTGCACACCATAGATC > 1:26604/1‑149 CCTTGTACAGGATGACGAACGCGACGCCGTCCTCTTCGTCCTGGGCAATGCGGCGGAAACCGGCTTGCTCGGCCATTTCGATGGCCGCCGGGTTGCTCAGCGGGATGCGCTTGTAGCCCGGCCACTGGCGCCATTGCACACCATAGATC > 8:91822/1‑149 CTTGTACAGGATGACGAACGAGACGCCGTCCTCTTCGTCCTGGGCAATGCGGCGGAAACCGGCTTGCTCGGCCATTTCGATGGCCGCCGGGTTGCTCAGCGGGATGCGCTTGTAGCCCGGCCACTGGCGCCATTGCACACCATAGATC > 2:270615/1‑148 AAGCGCATCCCGCTGAGCAACCCGGCGGCCATCGAAATGGCCGAGCAAGCCGGTTTCCGCCGCATTGCCCAGGACGAAGAGGACGGCGTCGCGTTCGTCATCCTGTACAAGGCGATCGACCAGGTACGCCAGTGCCTGGACACCATCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5867357‑5867208‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgccTTGTACAGGATGACGAACGCGACGCCGTCCTCTTCGTCCTGGGCAATGCGGCGGAAACCGGCTTGCTCGGCCATTTCGATGGCCGCCGGGTTGCTCAGCGGGATGCGCTTGTAGCCCGGCCACTGGCGCCATTGCACACCATAGATC > NC_002947/5867248‑5867394 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |