New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6017044 =	48 (1.140)	3 (0.080)	3/242	NT	6.8%	coding (290/423 nt)	PP_5267	cytochrome c5
	?	NC_002947	6017093 =	37 (0.930)					coding (241/423 nt)	PP_5267	cytochrome c5

TGCAAAGGCATGGAAGTGGCCGCTGCAGCGGGTGGCGGGGGAGCCAAAACGCCGGATGAAATCATCGCCAAGCACTGCAACGCCTGCCATGGCAGCGGCTTGCTCGGCGCGCCTAAAATTGGTGACACCGCCGCGTGGAAAGAACGCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6017195‑6017044 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgccgaGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGCCAACCGGCTCCAG  >  NC_002947/6017093‑6017234                                                                                                                                                                                                                                                                                                        TGCAAAGGCATGGAAGTGGCCGCTGCAGCGGGTGGCGGGGGAGCCAAAACGCCGGATGAAATCATCGCCAAGCACTGCAACGCCTGCCATGGCAGCGGCTTGCTCGGCGCGCCTAAAATTGGTGACACCGCCGCGTGGAAAGAACGCGC                                                                                                                                                   <  6:240270/149‑1   CAAAGGCATGGAAGTGGCCGCTGCAGCGGGTGGCGGGGGAGCCAAAACGCCGGATGAAATCATCGCCAAGCACTGCAACGCCTGCCATGGCAGCGGCTTGCTCGGCGCGCCTAAAATTGGTGACACCGCCGCGTGGAAAGAACGCGCC                                                                                                                                                  >  5:53342/1‑148             GAAGTGGCCGCTGCAGCGGGTGGCGGGGGAGCCAAAACGCCGGATGAAATCATCGCCAAGCACTGCAACGCCTGCCATGGCAGCGGCTTGCTCGGCGCGCCTAAAATTGGTGACACCGCCGCGTGGAAAGAACGCG                                                                                                                                                    >  1:119185/1‑136             GAAGTGGCCGCTGCAGCGGGTGGCGGGGGAGCCAAAACGCCGGATGAAATCATCGCCAAGCACTGCAACGCCTGCCATGGCAGCGGCTTGCTCGGCGCGCCTAAAATTGGTGACACCGCCGCGTGGAAAGAACGCG                                                                                                                                                    <  2:119185/136‑1                                                                                                    TTGCTCGGCGCGCCTAAAATTGGTGACACCGCCGCGTGGAAAGAACGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCA                                                         <  7:144373/140‑1                                                                                                    TTGCTCGGCGCGCCTAAAATTGGTGACACCGCCGCGTGGAAAGAACGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCA                                                         >  8:144373/1‑140                                                                                                        TCGGCGCGCCTAAAATTGGTGACACAGCCGCGTGGAAAGAACGCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATAAGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTT                                            >  1:85860/1‑149                                                                                                                                                  GCGCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGCCAACCGGCTCCAG  >  6:44553/1‑149                                                                                                                                                    GCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCT                                              >  5:155394/1‑103                                                                                                                                                    GCCGAGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCT                                              <  6:155394/103‑1                                                                                                                                                                                                                                                                                                        TGCAAAGGCATGGAAGTGGCCGCTGCAGCGGGTGGCGGGGGAGCCAAAACGCCGGATGAAATCATCGCCAAGCACTGCAACGCCTGCCATGGCAGCGGCTTGCTCGGCGCGCCTAAAATTGGTGACACCGCCGCGTGGAAAGAACGCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6017195‑6017044 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgccgaGCAAGCCGCTGCCATGGCAGGCGTTGCAGTGCTTGGCGATGATTTCATCCGGCGTTTTGGCTCCCCCGCCACCCGCTGCAGCGGCCACTTCCATGCCTTTGCACTCCTGGCCCTGGACGCACACCTGGCCAACCGGCTCCAG  >  NC_002947/6017093‑6017234

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.