New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6080876	36 (0.850)	3 (0.080)	3/240	NT	8.5%	coding (820/897 nt)	PP_5332	hypothetical protein
	?	NC_002947	= 6080914	31 (0.790)					coding (858/897 nt)	PP_5332	hypothetical protein

TCGTCGACCCGCATTGGAATCGGCGGATTACCTTGACCAGCAGCGGCTCGCGCTCGGCGGTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6080724‑6080876 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgaatgACTCGCCCCAGGCTTCAACTCCACCAGGTCATCCCACACATTCGCTGTCTCGATGCACAGCATTCGCTGCCATCCATCGTCAGCCATGTCCGCCAGCTCCTTGGCCCGCTCGGTCCACGGGTTCCAGATCACCGCCGAGCG  <  NC_002947/6080914‑6080774                                                                                                                                                                                                                                                                                                        TCGTCGACCCGCATTGGAATCGGCGGATTACCTTGACCAGCAGCGGCTCGCGCTCGGCGGTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCG                                                                                                                                                   <  6:14682/149‑1                                                        GGCGGTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATAGCTGACGATGGATGGCAGCGAATGCTGTGCATCTAGACAGCGAATGACTCGCCCCAGGCTTCAACTCCACCAGGTCATCCCACACTTTCGCTGTC                                                                                              <  8:160808/147‑1                                                                               CCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGACTCGCCCCAGGCTTCAACTCCACCAGGTCATCCCACACATTCGCTGTCTCGAT                                                                                         >  7:49384/1‑129                                                                               CCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGACTCGCCCCAGGCTTCAACTCCACCAGGTCATCCCACACATTCGCTGTCTCGAT                                                                                         <  8:49384/129‑1                                                                                                                                                  AGCGAATGACTCGCCCCAGGCTTCAACTCCACCAGGTCATCCCACACATTCGCTGTCTCGATGCACAGCATTCGCTGCCATCCATCGTCAGCCATGTCCGCCAGCTCCTTGGCCCGCTCGGTCCACGGGTTCCAGATCACCGCCGAGCG  >  5:80214/1‑149                                                                                                                                                                                                                                                                                                        TCGTCGACCCGCATTGGAATCGGCGGATTACCTTGACCAGCAGCGGCTCGCGCTCGGCGGTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6080724‑6080876 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgaatgACTCGCCCCAGGCTTCAACTCCACCAGGTCATCCCACACATTCGCTGTCTCGATGCACAGCATTCGCTGCCATCCATCGTCAGCCATGTCCGCCAGCTCCTTGGCCCGCTCGGTCCACGGGTTCCAGATCACCGCCGAGCG  <  NC_002947/6080914‑6080774

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.