New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6080876	36 (0.850)	3 (0.080)	3/240	NT	8.5%	coding (820/897 nt)	PP_5332	hypothetical protein
	?	NC_002947	= 6080914	31 (0.790)					coding (858/897 nt)	PP_5332	hypothetical protein

CGCTCGGCGGTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGGGCAATTATCAAAGGTCTGCGTCTTCCACCACCCTCACCTTGTCTG  >  NC_002947/6080774‑6081052                                                                                                                                             |                                                                                                                                           cgcTCGGCGGTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTcattcgct                                                                                                                                    >  5:80214‑M2/1‑141 (MQ=255)   cTCGGCGGTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTgg                                                                                                                                  <  2:20596/149‑1 (MQ=255)     cggcggTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGc                                                                                                                                >  2:231534/1‑149 (MQ=255)         ggTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTcc                                                                                                                            <  4:93867/149‑1 (MQ=255)                tGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTgg                                                                                                                                  >  1:32543/1‑136 (MQ=255)                tGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTgg                                                                                                                                  <  2:32543/136‑1 (MQ=255)                  gAACCCGTGGTCCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATTACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGtt                                                                                                                   <  4:172416/149‑1 (MQ=255)                        gTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCCGGGCGTCCAGATCGGTTGTGaa                                                                                                              >  8:186160/1‑148 (MQ=255)                                       cAAGGAGCTGGCGGACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGc                                                                                              >  3:100027/1‑149 (MQ=255)                                                 gCGGACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTa                                                                                    >  8:130597/1‑149 (MQ=255)                                                    gACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCg                                                                                 <  7:130597/149‑1 (MQ=255)                                                    gACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCg                                                                                 <  6:72116/149‑1 (MQ=255)                                                     aCATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCgg                                                                                >  6:139794/1‑149 (MQ=255)                                                             gACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTcg                                                                        >  4:106744/1‑149 (MQ=255)                                                              aCGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTc                                                                         <  5:139794/147‑1 (MQ=255)                                                              aCGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCCCTGGGCGTCCAGATCGGATGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGACTCTAcgc                                                                       >  4:135886/1‑149 (MQ=255)                                                                   ggatgtCAGAGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTTAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCGTCTCGGTCt                                                                  >  6:18803/1‑149 (MQ=255)                                                                    gatggCAGCTAATGCTGTGCATCGAGACATCGAAGGTTTGGGAGTCCCTGGGGGCTTGGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGAGCGGTTGTGAAAATATATGAGCCATGCTCTTTTTTTACCGGCCTCTTCGCGTGcgt                                                                 <  5:18803/149‑3 (MQ=255)                                                                    gatggCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCGGGc                                                                   >  5:122935/1‑147 (MQ=255)                                                                        gCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACGTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCGGGCTTGcc                                                              <  3:135886/148‑1 (MQ=255)                                                                         cAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCggg                                                                    <  1:186209/141‑1 (MQ=255)                                                                         cAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCggg                                                                    >  2:186209/1‑141 (MQ=255)                                                                             gAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTGGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCGGGCAAGCCCGCGaa                                                        <  8:212609/149‑1 (MQ=255)                                                                              aaTGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCGGGCAAGCCCGCGAag                                                       <  6:122935/149‑1 (MQ=255)                                                                                  cTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCCGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCGGGCAAGCCCGCGAAGAGGc                                                   <  7:186160/149‑1 (MQ=255)                                                                                        aTCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTcattcgctgtctcgatgcacagcattcgctgccatccatcgtcagccatgtccgccagctccttggcccgctcgg                                                                 >  7:49384‑M2/1‑54 (MQ=255)                                                                                        aTCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTcattcgctgtctcgatgcacagcattcgctgccatccatcgtcagccatgtccgccagctccttggcccgctcgg                                                                 <  8:49384‑M2/129‑76 (MQ=255)                                                                                             gaCAGCGAAAGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTcattcgctgtctagatgcacagcattcgctgccatccatcgtcagctatgtccgccagctccttggcccgctcggtccacgggttccagatcaccgcc                                          <  8:160808‑M2/147‑99 (MQ=255)                                                                                                aGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGTTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCg                                                 <  8:62579/137‑1 (MQ=255)                                                                                                aGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCg                                                 >  7:62579/1‑137 (MQ=255)                                                                                                  cGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGGGCAATTATCaaa                                   <  4:100027/149‑1 (MQ=255)                                                                                                         gtgGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGGGCAATTATCAAAGGTCTGc                            <  3:106744/149‑1 (MQ=255)                                                                                                          tgGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCCCGGGCTTGCCCGCGAACAGGCCGGGGCAATTATAAAAGGTCTGCg                           >  4:254785/1‑149 (MQ=255)                                                                                                                  catggtggAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCATATCGGTTGTCAAAATATCTGAGCCCTGCTCTTTTTTAACCGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGGGCAATTATCAAAGGTCTGCGGCTTccac                   <  1:207157/147‑1 (MQ=255)                                                                                                                   cTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCGGGCTTTCCCGCGAAGAGGCCGGGGGAATTATCAAAGGTCTGCGTCTTcgac                   >  3:18679/1‑148 (MQ=255)                                                                                                                      gtggAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCGGGCTTGCCCGCGAaga                                                      <  4:160181/110‑1 (MQ=255)                                                                                                                      gtggAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCGGGCTTGCCCGCGAaga                                                      >  3:160181/1‑110 (MQ=255)                                                                                                                                 gCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGGGCAATTATCAAAGGTCTGCGTCTTCCACCACCCTCACCTTGTc    >  2:141505/1‑149 (MQ=255)                                                                                                                                    tGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGGGCAATTATCAAAGGTCTGCGTCTTCCACCACCCTCACCTTGTCTg  >  1:104110/1‑148 (MQ=255)                                                                                                                                             |                                                                                                                                           CGCTCGGCGGTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGACGATGGATGGCAGCGAATGCTGTGCATCGAGACAGCGAATGTGTGGGATGACCTGGTGGAGTTGAAGCCTGGGGCGAGTCATTCGCTGGGCGTCCAGATCGGTTGTGAAAATATCTGAGCCCTGCTCTTTTTTTACCGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGGGCAATTATCAAAGGTCTGCGTCTTCCACCACCCTCACCTTGTCTG  >  NC_002947/6080774‑6081052

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.