New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 111497	52 (1.230)	4 (0.100)	4/248	NT	7.5%	coding (1517/1590 nt)	ctaD	cytochrome c oxidase subunit 1
	?	NC_002947	= 111528	49 (1.210)					coding (1548/1590 nt)	ctaD	cytochrome c oxidase subunit 1

CCGACTACAACCTGCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCTGTTGATGCTGACGGTGGTGATGTTCGC  >  NC_002947/111350‑111644                                                                                                                                                     |                                                                                                                                                    ccGACTACAACCTGCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGcc                                                                                                                                                    >  4:178541/1‑149 (MQ=255)        cAACCTGCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGcc                                                                                                                                             >  1:18077/1‑149 (MQ=255)          aCCTGCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCtt                                                                                                                                           <  7:137553/149‑1 (MQ=255)          aCCTGCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCtt                                                                                                                                           >  3:196773/1‑149 (MQ=255)            cTGCAGTTCGCCGATTTCAACATGTTGTCGTCGATCGGCTCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGa                                                                                                                                         <  7:237584/149‑1 (MQ=255)            cTGCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGa                                                                                                                                         <  3:178541/149‑1 (MQ=255)            cTGCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGa                                                                                                                                         <  3:126524/149‑1 (MQ=255)             tGCAGTTTGAGGATTTCAACATGGTGTCGTCGATCGGCTCGTTCATGTTCGGCGCCACGCAGATCTTCCTCCTTTTCATTGTCATGAAGTGCTTCC‑GCGTGGGCGGGTCGTCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGa                                                                                                                                         <  6:70542/148‑1 (MQ=255)             agCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAg                                                                                                                                        >  3:199262/2‑149 (MQ=255)                  ttCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTc                                                                                                                                   >  5:135904/1‑149 (MQ=255)                    cGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCg                                                                                                                                  <  4:196773/148‑1 (MQ=255)                         aTTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGCTAccc                                                                                                                            >  5:183408/1‑149 (MQ=255)                            tCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCACaggcgagggtatcgaccactcaaggccc                                                                                                                         >  1:210779‑M1/1‑121 (MQ=255)                             cAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGc                                                                                                                        >  4:29840/1‑149 (MQ=255)                             cAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGc                                                                                                                        >  1:198246/1‑149 (MQ=255)                               aCATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCt                                                                                                                      >  1:134371/1‑149 (MQ=255)                                  tGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCTGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTgcg                                                                                                                   >  8:141780‑M2/1‑146 (MQ=255)                                  tGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCaggcgagggtatcgaccactcaaggccctcggcg                                                                                                                   <  7:162491‑M1/149‑35 (MQ=255)                                     tgtCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGccc                                                                                                                <  2:18077/149‑1 (MQ=255)                                       tcgtcgATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCACaggcgagggtatcgaccactcaaggccctcggcgccat                                                                                                               <  2:210779‑M1/148‑39 (MQ=255)                                        cgtcgATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTAc                                                                                                             <  1:150161/149‑1 (MQ=255)                                         gtcgTTCGGCGGGTTCATGTTCGGCGCCACTCAGATCTTCTTCCTTTTCTTTGTCATCAAGTGCATCCGGAGGTGGGGCGCCGGCACCGGCCAAACCCTGTGATGGCGCCGAGGGCCTTGAGTGGt                                                                                                                                    <  1:73907/126‑1 (MQ=255)                                         gtcgATCGGCGCGTTCATGTTCGGCGCCACGCAGCTCTTCTTCCTGTTCATTGTCATCAAGTGCATAC‑GCGGTGGCGCGCCGGCACCGGCCAAAACATGGGATGGCGCCGAGGGCCGTGAGTGGt                                                                                                                                    >  2:73907/1‑125 (MQ=255)                                           cgATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCATACcac                                                                                                          <  7:215152/149‑1 (MQ=255)                                             aTCGGCGCGTTCATGTTCGGCGCCTCGCAGATCTTCTTCCTGTTCATTGTCATCCAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCaggcgagggtatcgaccactacaggccctcggcgccatcccagg                                                                                                         <  7:169045‑M1/148‑45 (MQ=255)                                              tCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACAcc                                                                                                       <  2:142263/149‑1 (MQ=255)                                                            ttCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACAccccc                                                                                         >  5:76877/1‑149 (MQ=255)                                                                      cGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGaaa                                                                               <  3:29840/149‑1 (MQ=255)                                                                       gCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGaaa                                                                               >  8:195356/1‑148 (MQ=255)                                                                       gCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAAt                                                                              <  3:215164/149‑1 (MQ=255)                                                                        gaGATCTTTTTCGTTTTCATTGTCATCAAGTGCATCC‑TCGGTGGTGCGTCGGTACGTGCTTAACCCTTGGANGTCGCCGTGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCGCTACCACACCTTCCAGACACCCCCGGAAGTGAAATa                                                                             <  1:86187/148‑1 (MQ=255)                                                                        cAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATa                                                                             <  7:195356/149‑1 (MQ=255)                                                                        cAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATa                                                                             <  2:198246/149‑1 (MQ=255)                                                                              ttcttcCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAAcc                                                                       >  2:146263/1‑149 (MQ=255)                                                                                   ccTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGcc                                                                   <  2:134371/148‑1 (MQ=255)                                                                                     tGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCAt                                                                 >  2:137170/1‑148 (MQ=255)                                                                                                 tcaAGTGCATCC‑GCTGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCg                                                    <  2:166668/149‑1 (MQ=255)                                                                                                 tcaAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGccc                                                                                                                <  2:220168/89‑1 (MQ=255)                                                                                                 tcaAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGccc                                                                                                                >  1:220168/1‑89 (MQ=255)                                                                                                 tcaAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCg                                                    >  6:241605/1‑149 (MQ=255)                                                                                                 tcaAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCg                                                    >  6:237351/1‑149 (MQ=255)                                                                                                   aaGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCgg                                                   <  1:137170/148‑1 (MQ=255)                                                                                                   aaGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCgg                                                   <  2:73135/148‑1 (MQ=255)                                                                                                        cATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAAc                                             >  1:138385/1‑149 (MQ=255)                                                                                                          tCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGc                                           >  2:268310/1‑149 (MQ=255)                                                                                                            c‑gcgGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCt                                         <  1:268310/149‑1 (MQ=255)                                                                                                               cgGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTgg                                       <  5:241605/149‑1 (MQ=255)                                                                                                               cgGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTgg                                       <  5:237351/149‑1 (MQ=255)                                                                                                                     cgcgcCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAAcgc                                 >  5:208105/1‑149 (MQ=255)                                                                                                                       cgcCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACgcgc                               >  7:91327/1‑149 (MQ=255)                                                                                                                       cgcCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACgcgc                               >  1:236848/1‑149 (MQ=255)                                                                                                                             cACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCTGTTg                         <  1:146263/149‑1 (MQ=255)                                                                                                                                cGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACAccccc                                                                                         <  4:92137/82‑1 (MQ=255)                                                                                                                                    cAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCTGTTGATGCTGa                  <  6:76877/149‑1 (MQ=255)                                                                                                                                        cccTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTc                                                     >  1:14260/1‑110 (MQ=255)                                                                                                                                        cccTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTc                                                     <  2:14260/110‑1 (MQ=255)                                                                                                                                         ccTGGGATGGCGCCGAGGGCCTGTAGTGGTCGATACCCTCGCCTgcgccatcccagggtttggccggtgccggcgcgccaccgcggatgcactggatgacaatgaacaggaagaagatctgcgaggcgccgaacatgaacgcgccgat              <  7:169045‑M2/148‑105 (MQ=255)                                                                                                                                              gATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCTGTTGATGCTGACGGTGGTGAt        <  2:236848/149‑1 (MQ=255)                                                                                                                                              gATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCTGTTGATGCTGACGGTGGTGAt        >  1:261605/1‑149 (MQ=255)                                                                                                                                               aTGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTgtgccatcccagggtttggccggtgccggcgcgccaccgcggatgcacttgatgacaatgaacaggaagaagatctgcgtggcgccgaacatgaacgcgccgatcgacga        <  2:210779‑M2/148‑111 (MQ=255)                                                                                                                                                   cgcaggcgagggtatcgaccactcaaggccctcggcgccatcccagggtttggcaggtgccggcgcgccaccgcggatgcacttgatgacaatgaacaggaagaagatctgcgtggcgccgaacatgaacgcgccgatcgacgacacca   >  8:141780‑M1/1‑3 (MQ=255)                                                                                                                                                   cgcCGAGGGCCTTGAGTGGTCGATACCCTCGCCTgcgccatcccagggtttggccggtgccggcgcgccaccgcggatgcacttgatgacaatgaacaggaagaagatctgcgtggcgccgaacatgaacgcgccgatcgacgacacca   <  7:162491‑M2/149‑116 (MQ=255)                                                                                                                                                   cgcCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCTGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCTGTTGATGCTGACGGTGGTGATGTTCg   >  7:199153/1‑149 (MQ=255)                                                                                                                                                    gcCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCTGTTGATGCTGACGGTGGTGATGTTCGc  >  1:13045/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CCGACTACAACCTGCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACGCAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCC‑GCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGAGGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAGGAACCCGCCATGAACGGCCTGTCGGTGAAACGCCTGGTAACGCGCCTGTTGATGCTGACGGTGGTGATGTTCGC  >  NC_002947/111350‑111644

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.