New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	402553 =	57 (1.350)	4 (0.100)	3/244	NT	8.0%	coding (645/669 nt)	msrA	peptide methionine sulfoxide reductase MsrA
	?	NC_002947	402652 =	38 (0.950)					coding (546/669 nt)	msrA	peptide methionine sulfoxide reductase MsrA

GGGCTTATGTTCACCGGCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGATCTCACCGAAGCCGGCCTTGCTCAGCTCGGC  >  NC_002947/402407‑402699                                                                                                                                                   |                                                                                                                                                   gggCTTATGTTCACCGGCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTggcag                                                                                                                                                  <  8:41288/149‑1 (MQ=255)       atcttCACCGGCTGCAGCTGCACTCGCTCAAGCTGGCCGGTTTCGTGCAACACGACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGcaca                                                                                                                                             <  3:34109/145‑1 (MQ=255)       aTGTTCACCGTCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGcac                                                                                                                                              <  7:219255/147‑1 (MQ=255)         gTTCACCGGCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGc                                                                                                                                          >  2:75235/1‑149 (MQ=255)                 gctgcagctgcaCACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGTTgccg                                                                                                                                  <  6:69841/149‑1 (MQ=255)                     cagctgcaCACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTgccgcc                                                                                                                                <  3:17972/147‑1 (MQ=255)                     cagctgcaCACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGa                                                                                                                              >  3:59829/1‑149 (MQ=255)                     cagctgcaCACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTAGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGa                                                                                                                              >  1:67000/1‑149 (MQ=255)                          gcaCACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCg                                                                                                                         >  2:18069/1‑149 (MQ=255)                             cacGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAg                                                                                                                      >  4:124762/1‑149 (MQ=255)                                      gCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTcc                                                                                                             <  3:196453/149‑1 (MQ=255)                                          gCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCgg                                                                                                           <  1:18069/147‑1 (MQ=255)                                            cGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTc                                                                                                       >  7:192217/1‑149 (MQ=255)                                               tttCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTg                                                                                                    <  2:27228/149‑1 (MQ=255)                                                   gTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGc                                                                                                                                          >  3:173864/1‑107 (MQ=255)                                                   gTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGc                                                                                                  >  3:225285/1‑147 (MQ=255)                                                   gTGCAACACCACCATGACATTGCGCACTAAACGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGc                                                                                                                                          <  4:173864/107‑1 (MQ=255)                                                    tGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAg                                                                                               >  7:238495/1‑149 (MQ=255)                                                     gCAACACCACCATGCCCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAg                                                                                                                      <  7:10281/125‑1 (MQ=255)                                                     gCAACACCACCATGCCCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAg                                                                                                                      <  7:14186/125‑1 (MQ=255)                                                     gCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAg                                                                                                                      >  8:14186/1‑125 (MQ=255)                                                     gCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAg                                                                                                                      >  8:10281/1‑125 (MQ=255)                                                      cAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAgg                                                                                              >  1:87770/1‑148 (MQ=255)                                                      cAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAgg                                                                                              <  8:192217/148‑1 (MQ=255)                                                          accaccATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTgg                                                                                                   <  7:87441/139‑1 (MQ=255)                                                          accaccATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTgg                                                                                                   >  8:87441/1‑139 (MQ=255)                                                          accaccATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTActg                                                                                         >  7:63635/1‑149 (MQ=255)                                                          accaccATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTActg                                                                                         >  4:97773/1‑149 (MQ=255)                                                           acagctggaacaggccaaggccagccgcgacgccttccaggccgagctgagcaaggccggcttcggtgagatcaccaccgaaatcgacCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTActgc                                                                                        <  8:23958‑M1/61‑1 (MQ=255)                                                             accaTGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTActgctg                                                                                      >  6:7843/1‑149 (MQ=255)                                                                 tGACCTTTCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGACGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCtggtgg                                                                                  <  4:191711/149‑1 (MQ=255)                                                                 tGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCtggtgg                                                                                  <  2:87770/149‑1 (MQ=255)                                                                 tGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCtggtgg                                                                                  <  8:238495/149‑1 (MQ=255)                                                                 tGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGGCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCTAGGTACTGCtggtgg                                                                                  <  8:172077/149‑1 (MQ=255)                                                                   aCCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCGGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCtggtgg                                                                                  >  7:36229/1‑147 (MQ=255)                                                                    ccTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAg                                                                               <  1:75235/149‑1 (MQ=255)                                                                      ttGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGACGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGc                                                                             >  6:46534/1‑149 (MQ=255)                                                                          gcACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTCGCCAGGTACTGCtggt                                                                                    <  2:23702/138‑1 (MQ=255)                                                                          gcACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTAGCCAGGTACTGCtggt                                                                                    >  1:23702/1‑138 (MQ=255)                                                                             cGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCg                                                                      <  3:83921/149‑1 (MQ=255)                                                                              gAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCAGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTAATGCTGGTGGTAGGCCTCGGCg                                                                      >  7:180164/1‑148 (MQ=255)                                                                                aaGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGaaa                                                                   >  3:242787/1‑149 (MQ=255)                                                                                     gACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGAc                                                              >  5:176506/1‑149 (MQ=255)                                                                                          gccttccaggccgagctgagcaaggccggcttcggtgagatcaccaccgaaatccacCAGGCACACGCAGGTCCCGCCGATGCCGCAGTAGCCGTCCGGGATCTTGCCCAGGAACTGCTGGTGGTACGCCTAGGCGAAATAGAcggtcg                                                         <  6:190110‑M1/92‑1 (MQ=255)                                                                                            cttccaggccgagctgagcaaggccggcttcggtgagatcaccaccgaaatcgacCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGAcggtcggt                                                       >  7:23958‑M1/56‑149 (MQ=255)                                                                                               aGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCGGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGcc                                                    <  8:36229/149‑1 (MQ=255)                                                                                               aGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTCCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGcc                                                    >  4:6177/1‑149 (MQ=255)                                                                                                   gccgagctgagcatggcctgcttcggtgagatctccaccgaaatcgacCAGTCACACGCCGGTGCCGCCGATGACGCAGAAGCCGTCCTGGTTGTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACTGTCGGTTCctgtt                                                >  5:190110‑M1/49‑147 (MQ=255)                                                                                                    aaCAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTc                                               <  5:7843/149‑1 (MQ=255)                                                                                                    aaCAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTc                                               <  3:124762/149‑1 (MQ=255)                                                                                                     aCAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGa                                                               >  5:180441/1‑132 (MQ=255)                                                                                                     aCAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGa                                                               <  6:180441/132‑1 (MQ=255)                                                                                                          gTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTc                                         >  6:128631/1‑149 (MQ=255)                                                                                                              tCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCggtg                                     <  8:63635/149‑1 (MQ=255)                                                                                                              tCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCggtg                                     <  8:246951/149‑1 (MQ=255)                                                                                                                    tCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGAtc                               >  4:77728/1‑149 (MQ=255)                                                                                                                         cTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGATCTCAcc                          <  4:59829/149‑1 (MQ=255)                                                                                                                         cTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGATCTCAcc                          <  2:67000/149‑1 (MQ=255)                                                                                                                               ttACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGTTAGGCCTCGGCGAAATAGACGGTCGGTGCATGGTCGATTTCggag                                     >  4:25266/1‑130 (MQ=255)                                                                                                                               ttACATTGCATGGTGGGTGGCAGGCACACGCCGGTGCCGCCGTTGCCGCTGTAGCCGTCCGGGTTCTTGGCCAGGTACTTCTGGTGGTAGGCCTCGGCGAAATTGACGGTCGGTGCCTGGTCGATTTCggtg                                     <  3:25266/132‑1 (MQ=255)                                                                                                                                tACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGATCTCACCGAAGCCg                   >  7:86695/1‑149 (MQ=255)                                                                                                                                           cTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGATCTCACCGAAGCCGGCCTTGCTCAg        <  6:176506/149‑1 (MQ=255)                                                                                                                                                 ggcaggcaCACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTg                                                  >  6:200614/1‑101 (MQ=255)                                                                                                                                                 ggcaggcaCACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTg                                                  <  5:200614/101‑1 (MQ=255)                                                                                                                                                 ggcaggcaCACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGATCTCACCGAAGCCGGCCTTGCTCAGCTCGGc  <  1:271233/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                   GGGCTTATGTTCACCGGCTGCAGCTGCACACGCTCAAGCTGGCCGGTTTCGTGCAACACCACCATGACCTTGCGCACGAAAGGCGACAACGGCGAGTGGAACAGGGTCATCGTGCTCATGCTTCAGTTACCTTGCAGGCTGGGTGGCAGGCACACGCCGGTGCCGCCGATGCCGCAGTAGCCGTCCGGGTTCTTGGCCAGGTACTGCTGGTGGTAGGCCTCGGCGAAATAGACGGTCGGTGCCTGGTCGATTTCGGTGGTGATCTCACCGAAGCCGGCCTTGCTCAGCTCGGC  >  NC_002947/402407‑402699

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.