New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 604803	47 (1.110)	3 (0.070)	3/246	NT	6.6%	coding (116/969 nt)	thiL	thiamin monophosphate kinase
	?	NC_002947	= 604838	40 (0.990)					coding (151/969 nt)	thiL	thiamin monophosphate kinase

GCGAACAAGCGCTGATCCTGGCGCTGCCTGGCCATGGGTGAGTTCGAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGCGTTCGTTGGCTGTGGCGGCCAGTGACCTGGCAGCCATGGGCGCGACTGCAATCGGCTTCA  >  NC_002947/604655‑604946                                                                                                                                                     |                                                                                                                                                gCGAACAAGCGCTGATCCTGGCGCTGCCTGGCCATGGGTGAGTTCGAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGG                                                                                                                                                 >  5:217260‑M1/1‑149 (MQ=255)          cgcTGATCCTGGCGCTGCCTGGCCATGGGTGAGTTCGAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGTCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACt                                                                                                                                        <  8:1606/149‑1 (MQ=255)               aTCCTGGCGCTGCCTGGCCATGGGTGAGTTCGAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCgg                                                                                                                                   >  3:214348/1‑149 (MQ=255)                tCCTGGCGCTGCCTGGCCATGGGTGAGTTCGAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGgt                                                                                                                                  >  2:33733/1‑149 (MQ=255)                    ggCGCTGCCTGGCCATGGGTGAGTTCGAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTcg                                                                                                                              >  1:230784/1‑149 (MQ=255)                           ccTGGCCATGGGTGAGTTCGAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTcgaccga                                                                                                                         <  3:144598/147‑1 (MQ=255)                             tGGCCATGGGTGAGTTCGAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACAcc                                                                                                                     >  2:173144/1‑149 (MQ=255)                                ccATGGGTGAGTTCGAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGCCGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTg                                                                                                                  >  8:59979/1‑149 (MQ=255)                                 cATGGGTGAGTTCGAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAg                                                                                                                                             >  3:202990/1‑121 (MQ=255)                                    gggTGAGTTCGAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGc                                                                                                                                            <  1:156215/119‑1 (MQ=255)                                    gggTGAGTTCGAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGc                                                                                                                                            >  2:156215/1‑119 (MQ=255)                                         aggtCGAGCTGAGCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGAGGCGCTGGGTATCGGCGACGACGGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCggg                                                                                                         <  5:7115/146‑1 (MQ=255)                                          gTTCGAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGccgggg                                                                                                        <  4:112961‑M2/149‑7 (MQ=255)                                           ttCGAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGt                                                                                                       <  2:29421/149‑1 (MQ=255)                                           ttCGAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGt                                                                                                       >  1:259646/1‑149 (MQ=255)                                           ttCGAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGt                                                                                                       <  1:173144/149‑1 (MQ=255)                                              gAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGcgaccagggtgtcggtcgacaccgccagttgctcaccggggggaa                                                                                                    <  7:21170‑M1/149‑46 (MQ=255)                                              gAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGtac                                                                                                     >  2:253426/1‑146 (MQ=255)                                               aGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGTCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACAccc                                                                                                                    <  5:134945/132‑1 (MQ=255)                                               aGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGTCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACAccc                                                                                                                    >  6:134945/1‑132 (MQ=255)                                                    aTCAACCATTACTTCGCCGCAGAGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCTACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTc                                                                                               <  4:49458/148‑1 (MQ=255)                                                     tgacacATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGATGGCGTGGCGCTGTGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCct                                                                                             <  7:223534/144‑1 (MQ=255)                                                     tCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCct                                                                                             >  3:146246/1‑149 (MQ=255)                                                       aaCCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCctg                                                                                            <  6:217260/148‑1 (MQ=255)                                                        aCCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGcgaccagggtgtcggtcgacaccgccagttgctcaccgg                                                                                                          <  7:46918‑M1/133‑40 (MQ=255)                                                        aCCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGcgaccagggtgtcggtcgacaccgccagttgctcaccgg                                                                                                          >  8:46918‑M1/1‑94 (MQ=255)                                                         ccATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCctgctg                                                                                         >  5:243456/1‑149 (MQ=255)                                                          cATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGccg                                                                                                           >  8:62877‑M2/1‑127 (MQ=255)                                                          cATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGccg                                                                                                           <  7:62877‑M2/130‑4 (MQ=255)                                                            ttACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGttt                                                                                      >  3:213727/1‑149 (MQ=255)                                                                ttCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGccg                                                                                                           >  6:189073‑M2/1‑121 (MQ=255)                                                                ttCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGccg                                                                                                           <  5:189073‑M2/124‑4 (MQ=255)                                                                              cTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTg                                                                    <  1:162923/149‑1 (MQ=255)                                                                                   cgcAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCTCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGGCCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAg                                                               >  6:149456/1‑149 (MQ=255)                                                                                      aGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTc                                                                                               <  6:89676/114‑1 (MQ=255)                                                                                      aGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTc                                                                                               >  5:89676/1‑114 (MQ=255)                                                                                          cggcgAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGcgttcgt                                                        <  2:259646/149‑1 (MQ=255)                                                                                             cgAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGCGTTCGTTgg                                                     <  6:243456/149‑1 (MQ=255)                                                                                             cgAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGCGTTCGTTgg                                                     <  4:214348/149‑1 (MQ=255)                                                                                                    gTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGCGTTCGTTGGCTGTggc                                              <  4:213727/149‑1 (MQ=255)                                                                                                         gcTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGCGTTCGTTGGCTGTGGCGGCCa                                         <  5:149456/149‑1 (MQ=255)                                                                                                          cTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGc                                                              <  8:169657/127‑1 (MQ=255)                                                                                                          cTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGc                                                              >  7:169657/1‑127 (MQ=255)                                                                                                               tATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGCGTTCGTTGGCTGTGGCGGCCAGTGAcc                                   >  6:227055/1‑149 (MQ=255)                                                                                                                 tCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGCGTTCGTTGGCTGTGGCGGCCAGTGACCt                                  <  1:177472/148‑1 (MQ=255)                                                                                                                 tCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGCGTTCGTTGGCTGTGGCGGCCAGTGACCTg                                 >  1:128008/1‑149 (MQ=255)                                                                                                                         gacTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGAAATTTCCTGATGTTTGAGATCCGTTGGTGATTGGCAAGCGTTGGTTGGGTGTGGCGGCAAGTGACAGGGCAGcaag                         >  8:165886/1‑146 (MQ=255)                                                                                                                            tGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGCCCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGCGTTCGTTGGCTGTGGCGGCCAGTGACCTGGCAGCCATggg                      >  6:237775/1‑149 (MQ=255)                                                                                                                            tGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGCGTTCGTTGGCTGTGGCGGCCAGTGACCTGGc                               >  4:33447/1‑140 (MQ=255)                                                                                                                            tGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGCGTTCGTTGGCTGTGGCGGCCAGTGACCTGGc                               <  3:33447/140‑1 (MQ=255)                                                                                                                            tGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGCGTTCGTTGGCTGTGGCGGCCAGTGACCTGGCAGCCATggg                      >  7:69453/1‑149 (MQ=255)                                                                                                                            tGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGATGCTTGGCCAGCGTTCGTTGGCTGTGGCGGCCAGTGACCTGGCAGCCATggg                      >  2:151462/1‑149 (MQ=255)                                                                                                                              cgcCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGCGTTCGTTGGCTGTGGCGGCCAGTGACCTGGCAGCCATggg                      <  8:69453/147‑1 (MQ=255)                                                                                                                                 ccTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGCGTTCGTTGGCTGTGGCGGCCAGTGACCTGGCAGCCATGGGCGCGa                 >  2:65523/1‑149 (MQ=255)                                                                                                                                    gctgGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCctg                                                                                            <  7:31579/71‑1 (MQ=255)                                                                                                                                    gctgGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCctg                                                                                            >  8:31579/1‑71 (MQ=255)                                                                                                                                         aCCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGCGTTCGTTGGCTGTGGCGGCCAGTGACCTGGCAGCCATGGGCGCGACTGCAATc         <  1:151462/149‑1 (MQ=255)                                                                                                                                         aCCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCATTGCTGCTTGGCCAGCGTTCGTTGGCTGTGGCGGCCAGTGACCTGGCAGCCATGGGCGCGACTGCAATc         <  2:230784/149‑1 (MQ=255)                                                                                                                                            ttCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGccggggggaaggtccagcagggcgcagtcgtcgccgatacccagcgccacgccctcgccgccctgcgcacagggcgctgcggcgaagtaatggttgatcagctc      <  7:21170‑M2/149‑105 (MQ=255)                                                                                                                                            gtCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTCGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGCGTTCGTTGGCTGTGGCGGCCAGTGACCTGGCAGCCATGGGCGCGACTGCAATCGGc      <  1:42092/148‑1 (MQ=255)                                                                                                                                                ccccGGcgaccagggtgtcggtcgacaccgccagttgctcaccggggggaaggtccagcagggcgcagtcgtcgccgatacccagcgccacgccctcgccgccctgcgcacagggcgctgcggcgaagtaatggttgatcagctcgaac  <  4:112961‑M1/149‑144 (MQ=255)                                                                                                                                                  ccGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGccggggggaaggtccagcagggcgcagtcgtcgccgatacccagcgccacgccctcgccgccctgcgcacagggcgctgcggcgaagtaatggt                <  7:46918‑M2/133‑95 (MQ=255)                                                                                                                                                  ccGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGccggggggaaggtccagcagggcgcagtcgtcgccgatacccagcgccacgccctcgccgccctgcgcacagggcgctgcggcgaagtaatggt                >  8:46918‑M2/1‑39 (MQ=255)                                                                                                                                                   cGGcgaccagggtgtcggtcgacaccgccagttgctcaccggggggaaggtccagcagggcgcagtcgtcgccgatacccagcgccacgccctcgccgccctgcgcacagggcgctgcggcgaagtaatg                  <  7:62877‑M1/130‑128 (MQ=255)                                                                                                                                                   cGGcgaccagggtgtcggtcgacaccgccagttgctcaccggggggaaggtccagcagggcgcagtcgtcgccgatacccagcgccacgccctcgccgccctgcgcacagggcgctgcggcgaagtaatg                  >  8:62877‑M1/1‑3 (MQ=255)                                                                                                                                                   cGGcgaccagggtgtcggtcgacaccgccagttgctcaccggggggaaggtccagcagggcgcagtcgtcgccgatacccagcgccacgccctcgccgccctgcgcacagggcgctgcggcgaa                        >  6:189073‑M1/1‑3 (MQ=255)                                                                                                                                                   cGGcgaccagggtgtcggtcgacaccgccagttgctcaccggggggaaggtccagcagggcgcagtcgtcgccgatacccagcgccacgccctcgccgccctgcgcacagggcgctgcggcgaa                        <  5:189073‑M1/124‑122 (MQ=255)                                                                                                                                                     |                                                                                                                                                GCGAACAAGCGCTGATCCTGGCGCTGCCTGGCCATGGGTGAGTTCGAGCTGATCAACCATTACTTCGCCGCAGCGCCCTGTGCGCAGGGCGGCGAGGGCGTGGCGCTGGGTATCGGCGACGACTGCGCCCTGCTGGACCTTCCCCCCGGTGAGCAACTGGCGGTGTCGACCGACACCCTGGTCGCCGGGGTGCACTTTCCTGCTGTTTGCGATCCGTTGCTGCTTGGCCAGCGTTCGTTGGCTGTGGCGGCCAGTGACCTGGCAGCCATGGGCGCGACTGCAATCGGCTTCA  >  NC_002947/604655‑604946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.