New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	653210 =	67 (1.590)	4 (0.100)	4/248	NT	5.9%	coding (1533/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
	?	NC_002947	653244 =	63 (1.550)					coding (1499/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL

GCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATCGA  >  NC_002947/653067‑653355                                                                                                                                                |                                                                                                                                                  ggccagagcctgtcgggcttgcgtgagctggtcgatgaagtgcaaggcaacgcccgcatgatcgaacaattggcggaagagtcggccaccattggcggggtactgacggtgatccgcgcgattgccgagcagaccaacctgctGGCAc                                                                                                                                               >  3:262797‑M1/144‑148 (MQ=255)            cGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGa                                                                                                                                   >  1:26364/1‑149 (MQ=255)                 ccGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATcgcg                                                                                                                              <  5:70188/149‑1 (MQ=255)                   ttgcgtgagctggtcgatgaagtgcaaggcaacgcccgcatgatcgaacaattggcggaagagtcggccaccattggcggggtactgacggtgatccgcgcgattgccgagcagaccaacctgctgg                                                                                                                                                  <  3:137891‑M1/2‑1 (MQ=255)                   ttgcgtgagctggtcgatgaagtgcaaggcaacgcccgcatgatcgaacaattggcggaagagtcggccaccattggcggggtactgacggtgatccgcgcgattgccgagcagaccaacctgctgg                                                                                                                                                  >  4:137891‑M1/126‑127 (MQ=255)                   gAACTTCTGGCGGCCTGCTACAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCgg                                                                                                                             >  3:178889/1‑148 (MQ=255)                    aaCTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCa                                                                                                                           >  1:200746/1‑149 (MQ=255)                    aaCTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCa                                                                                                                           <  7:35340/149‑1 (MQ=255)                       ttCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCAtt                                                                                                                         >  8:131119/1‑148 (MQ=255)                       tgcTGGCGGCCTGCGGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCACCTCGCCGGCACGGGCCGCtt                                                                                                                                      <  8:212324/133‑1 (MQ=255)                         cTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCa                                                                                                                       <  7:79057/148‑1 (MQ=255)                                 ctgctgCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCcag                                                                                                                >  6:106918/1‑147 (MQ=255)                                 ctgctgCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCcag                                                                                                                >  1:110463/1‑147 (MQ=255)                                     tgcAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGtt                                                                                                          <  5:91885/149‑1 (MQ=255)                                      gcAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTg                                                                                                         <  5:26221/149‑1 (MQ=255)                                        aGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTgg                                                                                                        >  8:9027/1‑148 (MQ=255)                                        aGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGt                                                                                                       <  2:28281/149‑1 (MQ=255)                                          gCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGt                                                                                                       >  5:13680/1‑147 (MQ=255)                                          gCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGt                                                                                                       <  6:13680/147‑1 (MQ=255)                                              tCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTc                                                                                                 <  5:250426/149‑1 (MQ=255)                                              tCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTc                                                                                                 <  4:67346/149‑1 (MQ=255)                                               cGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGt                                                                                                                     >  6:111188/1‑128 (MQ=255)                                                gATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCgg                                                                                               <  7:81856/149‑1 (MQ=255)                                                gATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCgg                                                                                               >  1:256963/1‑149 (MQ=255)                                                     aCGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGt                                                                                                                     >  5:248250/1‑122 (MQ=255)                                                     aCGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGt                                                                                                                     <  6:248250/122‑1 (MQ=255)                                                     aCGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATc                                                                                          >  2:166486/1‑149 (MQ=255)                                                      cGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATcg                                                                                         >  5:142661/1‑149 (MQ=255)                                                                  gCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGAt                                                                                  <  4:178889/144‑1 (MQ=255)                                                                  gCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCAcc                                                                              <  2:200746/148‑1 (MQ=255)                                                                    aattggcggaagagtcggccaccattggcggggtactgacggtgatccgcgcgattgccgagcagaccaacctgctGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCcagca                                                                                                              <  4:38654‑M1/38‑1 (MQ=255)                                                                    aattggcggaagagtcggccaccattggcggggtactgacggtgatccgcgcgattgccgagcagaccaacctgctGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCcagca                                                                                                              >  3:38654‑M1/77‑114 (MQ=255)                                                                         gCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTa                                                                       <  2:23062/148‑1 (MQ=255)                                                                          cccccGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATcgcg                                                                                       <  7:209170/131‑1 (MQ=255)                                                                          cccccGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATcgcg                                                                                       >  8:209170/1‑131 (MQ=255)                                                                            cccGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTAcccc                                                                   >  3:211432/1‑149 (MQ=255)                                                                            cccGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTAcccc                                                                   >  8:31271/1‑149 (MQ=255)                                                                                      gcTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAAtggtg                                                         <  7:131119/149‑1 (MQ=255)                                                                                      gcTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAAtggtg                                                         >  3:222985/1‑149 (MQ=255)                                                                                       caccattggcggggtactgacggtgatccgcgcgattgccgagcagaccaacctgctGGCACGGGCCGCTTCGATCGCGGCATTCa                                                                                                                       <  5:165293‑M1/29‑1 (MQ=255)                                                                                       caccattggcggggtactgacggtgatccgcgcgattgccgagcagaccaacctgctGGCACGGGCCGCTTCGATCGCGGCATTCa                                                                                                                       >  6:165293‑M1/58‑86 (MQ=255)                                                                                       cTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAAtggtgg                                                        <  2:110463/149‑1 (MQ=255)                                                                                               gTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCAcc                                                                              >  5:258478/1‑119 (MQ=255)                                                                                               gTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCAcc                                                                              <  6:258478/119‑1 (MQ=255)                                                                                               gTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGActct                                                >  6:154572/1‑149 (MQ=255)                                                                                                tGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCtt                                               <  2:256963/149‑1 (MQ=255)                                                                                                  aGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTc                                              <  7:9027/148‑1 (MQ=255)                                                                                                   gcgcACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCg                                            <  1:166486/149‑1 (MQ=255)                                                                                                       aCCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCaa                                        <  4:222985/149‑1 (MQ=255)                                                                                                        ccTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGACGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAAt                                       >  7:71232/1‑149 (MQ=255)                                                                                                         cTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAAtt                                      <  4:211432/149‑1 (MQ=255)                                                                                                             tCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTAccc                                                                    <  1:165591/115‑1 (MQ=255)                                                                                                             tCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTAccc                                                                    >  2:165591/1‑115 (MQ=255)                                                                                                             tCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTc                                  <  6:142661/149‑1 (MQ=255)                                                                                                                gCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGAt                               <  7:31271/149‑1 (MQ=255)                                                                                                                    ccACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGAGCATg                           >  4:244466/1‑149 (MQ=255)                                                                                                                     cACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAAtggtg                                                         >  5:228987/1‑118 (MQ=255)                                                                                                                     cACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAAtggtg                                                         <  6:228987/118‑1 (MQ=255)                                                                                                                     cACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGtt                                   <  1:33047/140‑1 (MQ=255)                                                                                                                     cACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGtt                                   >  2:33047/1‑140 (MQ=255)                                                                                                                     cACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGc                          >  4:7903/1‑149 (MQ=255)                                                                                                                     cACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGc                          >  6:37928/1‑149 (MQ=255)                                                                                                                     cACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGc                          >  8:229654/1‑149 (MQ=255)                                                                                                                     cACGGCAAAGCCACGGCCCATCTCGCCGCCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCTCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGc                          >  4:152329/1‑149 (MQ=255)                                                                                                                      aCGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCg                         >  7:47991/1‑149 (MQ=255)                                                                                                                        ggCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCggg                       <  4:216705/149‑1 (MQ=255)                                                                                                                         gCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGc                      >  4:43779/1‑149 (MQ=255)                                                                                                                          cAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCAGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCg                     >  1:214095/1‑149 (MQ=255)                                                                                                                              gCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGc                 <  2:26364/149‑1 (MQ=255)                                                                                                                                cACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCt               <  3:244466/149‑1 (MQ=255)                                                                                                                                 aCGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCtt              >  8:157581/1‑149 (MQ=255)                                                                                                                                 aCGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCtt              >  4:207306/1‑149 (MQ=255)                                                                                                                                    gCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCa           <  3:7903/149‑1 (MQ=255)                                                                                                                                    gCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCa           >  8:127435/1‑149 (MQ=255)                                                                                                                                             gCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCa      <  7:229654/145‑1 (MQ=255)                                                                                                                                             gCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATc    <  3:207306/147‑1 (MQ=255)                                                                                                                                             gCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATCGa  >  3:198961/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                  GCGCGCATCCCCGCCACCGAACTTCTGGCGGCCTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATCGA  >  NC_002947/653067‑653355

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.