New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	653210 =	67 (1.590)	4 (0.100)	4/248	NT	5.9%	coding (1533/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
	?	NC_002947	653244 =	63 (1.550)					coding (1499/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL

CTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATCGACCAGCTCACGCAAGCCCGACAGGCTCTGGCC  >  NC_002947/653099‑653386                                                                                                                                                  |                                                                                                                                               ctgctgCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCcag                                                                                                                                               >  1:110463/1‑147 (MQ=255) ctgctgCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCcag                                                                                                                                               >  6:106918/1‑147 (MQ=255)     tgcAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGtt                                                                                                                                         <  5:91885/149‑1 (MQ=255)      gcAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTg                                                                                                                                        <  5:26221/149‑1 (MQ=255)        aGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTgg                                                                                                                                       >  8:9027/1‑148 (MQ=255)        aGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGt                                                                                                                                      <  2:28281/149‑1 (MQ=255)          gCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGt                                                                                                                                      <  6:13680/147‑1 (MQ=255)          gCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGt                                                                                                                                      >  5:13680/1‑147 (MQ=255)              tCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTc                                                                                                                                <  5:250426/149‑1 (MQ=255)              tCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTc                                                                                                                                <  4:67346/149‑1 (MQ=255)                gATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCgg                                                                                                                              >  1:256963/1‑149 (MQ=255)                gATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCgg                                                                                                                              <  7:81856/149‑1 (MQ=255)                     aCGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATc                                                                                                                         >  2:166486/1‑149 (MQ=255)                      cGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATcg                                                                                                                        >  5:142661/1‑149 (MQ=255)                                  gCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGAt                                                                                                                 <  4:178889/144‑1 (MQ=255)                                  gCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCAcc                                                                                                             <  2:200746/148‑1 (MQ=255)                                    aattggcggaagagtcggccaccattggcggggtactgacggtgatccgcgcgattgccgagcagaccaacctgctGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCcagca                                                                                                                                             >  3:38654‑M1/77‑114 (MQ=255)                                    aattggcggaagagtcggccaccattggcggggtactgacggtgatccgcgcgattgccgagcagaccaacctgctGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCcagca                                                                                                                                             <  4:38654‑M1/38‑1 (MQ=255)                                         gCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTa                                                                                                      <  2:23062/148‑1 (MQ=255)                                          cccccGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATcgcg                                                                                                                      >  8:209170/1‑131 (MQ=255)                                          cccccGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATcgcg                                                                                                                      <  7:209170/131‑1 (MQ=255)                                            cccGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTAcccc                                                                                                  >  3:211432/1‑149 (MQ=255)                                            cccGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTAcccc                                                                                                  >  8:31271/1‑149 (MQ=255)                                                      gcTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAAtggtg                                                                                        >  3:222985/1‑149 (MQ=255)                                                      gcTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAAtggtg                                                                                        <  7:131119/149‑1 (MQ=255)                                                       cTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAAtggtgg                                                                                       <  2:110463/149‑1 (MQ=255)                                                               gTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCAcc                                                                                                             <  6:258478/119‑1 (MQ=255)                                                               gTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCAcc                                                                                                             >  5:258478/1‑119 (MQ=255)                                                               gTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGActct                                                                               >  6:154572/1‑149 (MQ=255)                                                                tGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCtt                                                                              <  2:256963/149‑1 (MQ=255)                                                                  aGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTc                                                                             <  7:9027/148‑1 (MQ=255)                                                                   gcgcACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCg                                                                           <  1:166486/149‑1 (MQ=255)                                                                       aCCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCaa                                                                       <  4:222985/149‑1 (MQ=255)                                                                        ccTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGACGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAAt                                                                      >  7:71232/1‑149 (MQ=255)                                                                         cTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAAtt                                                                     <  4:211432/149‑1 (MQ=255)                                                                             tCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTAccc                                                                                                   <  1:165591/115‑1 (MQ=255)                                                                             tCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTAccc                                                                                                   >  2:165591/1‑115 (MQ=255)                                                                             tCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTc                                                                 <  6:142661/149‑1 (MQ=255)                                                                                gCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGAt                                                              <  7:31271/149‑1 (MQ=255)                                                                                    ccACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGAGCATg                                                          >  4:244466/1‑149 (MQ=255)                                                                                     cACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAAtggtg                                                                                        >  5:228987/1‑118 (MQ=255)                                                                                     cACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAAtggtg                                                                                        <  6:228987/118‑1 (MQ=255)                                                                                     cACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGtt                                                                  >  2:33047/1‑140 (MQ=255)                                                                                     cACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGtt                                                                  <  1:33047/140‑1 (MQ=255)                                                                                     cACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGc                                                         >  4:7903/1‑149 (MQ=255)                                                                                     cACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGc                                                         >  8:229654/1‑149 (MQ=255)                                                                                     cACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGc                                                         >  6:37928/1‑149 (MQ=255)                                                                                     cACGGCAAAGCCACGGCCCATCTCGCCGCCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCTCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGc                                                         >  4:152329/1‑149 (MQ=255)                                                                                      aCGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCg                                                        >  7:47991/1‑149 (MQ=255)                                                                                        ggCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCggg                                                      <  4:216705/149‑1 (MQ=255)                                                                                         gCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGc                                                     >  4:43779/1‑149 (MQ=255)                                                                                          cAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCAGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCg                                                    >  1:214095/1‑149 (MQ=255)                                                                                              gCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGc                                                <  2:26364/149‑1 (MQ=255)                                                                                                cACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCt                                              <  3:244466/149‑1 (MQ=255)                                                                                                 aCGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCtt                                             >  8:157581/1‑149 (MQ=255)                                                                                                 aCGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCtt                                             >  4:207306/1‑149 (MQ=255)                                                                                                    gCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCa                                          >  8:127435/1‑149 (MQ=255)                                                                                                    gCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCa                                          <  3:7903/149‑1 (MQ=255)                                                                                                            tgctggcactgaatgccgcgatcgaagcggcccgtgccAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAAtt                                                                     >  3:38654‑M2/39‑114 (MQ=255)                                                                                                            tgctggcactgaatgccgcgatcgaagcggcccgtgccAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAAtt                                                                     <  4:38654‑M2/76‑1 (MQ=255)                                                                                                             gCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCa                                     <  7:229654/145‑1 (MQ=255)                                                                                                             gCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATc                                   <  3:207306/147‑1 (MQ=255)                                                                                                             gCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATCGa                                 >  3:198961/1‑149 (MQ=255)                                                                                                                 GCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATCGACCAg                             <  1:9084‑M1/149‑1 (MQ=255)                                                                                                                     tgaatgccgcgatcgaagcggcccgtgccAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAAtggtg                                                                                        >  6:165293‑M2/30‑86 (MQ=255)                                                                                                                     tgaatgccgcgatcgaagcggcccgtgccAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAAtggtg                                                                                        <  5:165293‑M2/57‑1 (MQ=255)                                                                                                                       gCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATCGACCAGCTCACg                       >  6:187477/1‑149 (MQ=255)                                                                                                                          gCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGc                                                                                      <  1:256542/83‑1 (MQ=255)                                                                                                                          gCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGc                                                                                      >  2:256542/1‑83 (MQ=255)                                                                                                                            ttCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCTCCAATTGTTCGATCATGCGGGAGTTGCCTTGCACTTCATCGACCAGCTCACGCAAGc                  >  5:189198/1‑149 (MQ=255)                                                                                                                              cGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCAGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATCGACCAGCTCACGCAAGc                  <  2:214095/147‑1 (MQ=255)                                                                                                                                      gCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATCGACCAGCTCACGCAAGCCCGACAGGct        <  5:106918/149‑1 (MQ=255)                                                                                                                                             gtgccAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATCGACCAGCTCACGCAAGCCCGACAGGCTCTGGcc  >  3:262797‑M2/6‑148 (MQ=255)                                                                                                                                                ccAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATCGACCAGCTCACGCaa                    >  4:137891‑M2/3‑127 (MQ=255)                                                                                                                                                ccAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATCGACCAGCTCACGCaa                    <  3:137891‑M2/125‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                               CTGCTGCAGGCGGTCGATCAACGCCTGGATCTCGCCGGTAGCCCCCGTGGTGCGCTGAGCCAGTGAGCGCACCTCATCGGCGACCACGGCAAAGCCACGGCCCATCTCGCCGGCACGGGCCGCTTCGATCGCGGCATTCAGTGCCAGCAGGTTGGTCTGCTCGGCAATCGCGCGGATCACCGTCAGTACCCCGCCAATGGTGGCCGACTCTTCCGCCAATTGTTCGATCATGCGGGCGTTGCCTTGCACTTCATCGACCAGCTCACGCAAGCCCGACAGGCTCTGGCC  >  NC_002947/653099‑653386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.