| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1419958 = | 49 (1.160) | 3 (0.070) | 3/250 | NT | 6.1% | coding (55/366 nt) noncoding (83/90 nt) |
PP_1244 PP_mr17 |
hypothetical protein C4 ncRNA |
| ? | NC_002947 | 1420038 = | 45 (1.100) | noncoding (3/90 nt) | PP_mr17 | C4 ncRNA | |||||
CAGGGCGCAGAGTACGTACTCTGAGGACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACGTGTGCGGGAAATCGTCGGCCTGTCAAAGCCGGCCGTTGATTTTGCAA > NC_002947/1419812‑1420097 | ttccttgtagggcgtttcccaaacatactgccaacccgctcaaacggttgcgacggattcggtcgcgctctagtctcggctcgtcgttgcaaaatcaacggccggctttgacaggccgacgatttcccgcacacgtgcactgtttaTgg < 5:32400‑M1/3‑1 (MQ=255)cAGGGCGCAGAGTACGTACTCTGAGGACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTgg < 6:95556/149‑1 (MQ=255) ctcAGAGTACGTACTCTGAGGACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTACAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCt > 8:177157/3‑149 (MQ=255) tGAGGACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAACCAAGAGGGTGGCAGCGGTAGATGGGGTGACAg > 6:189330/1‑149 (MQ=255) tGAGGACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGa > 3:176516/1‑146 (MQ=255) aGGACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGGATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACa < 8:190823/146‑1 (MQ=255) ggACTGGACCAGAGTGTCTTTCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTTGAGCTGCCTCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGAc < 6:30780/148‑1 (MQ=255) cTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAg < 7:177157/149‑1 (MQ=255) tGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCa < 8:141658/123‑1 (MQ=255) tGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCa > 7:141658/1‑123 (MQ=255) gACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGTTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAg < 4:133277/146‑1 (MQ=255) gACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGTTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAg > 3:133277/1‑146 (MQ=255) agagTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTTTACATGGGTTGACAGACCGAGGATCCCg < 3:131181/149‑1 (MQ=255) gagTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGtt < 8:69712/130‑1 (MQ=255) gagTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGtt > 7:69712/1‑130 (MQ=255) gagTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCg > 1:249649/1‑148 (MQ=255) agTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCg > 3:59087/1‑147 (MQ=255) agTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGa < 5:84885/149‑1 (MQ=255) gCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCg > 4:8162/1‑149 (MQ=255) gCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTCGCAGCTGTACATGGGTTGACAGACCGAGGATACCGGAGTAACTCg > 4:38815/1‑149 (MQ=255) tGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGAc > 3:104878/1‑116 (MQ=255) tGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGAc < 4:104878/116‑1 (MQ=255) tggtATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAg < 3:256012/149‑1 (MQ=255) tATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTg < 6:200602/149‑1 (MQ=255) gAGGGGGGGTTCAGGTACCAGGTTGCGCTATAACTTCTCCTGGATCTTTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGCTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCTCACGAAGGTggcg < 8:94070/148‑4 (MQ=255) gggACCATCTGGCGCATAAACATCTACAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAgccgcc < 2:218865/149‑1 (MQ=255) ggctcgtcgttgcaaaatcaacggccggctttgacaggccgacgatttcccgcacacgtgcactgtttaTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAgccgc > 3:141551‑M1/70‑147 (MQ=255) aTCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATaaa > 3:252945/1‑148 (MQ=255) ttGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCGCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGt > 1:221094/1‑131 (MQ=255) ttGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGt < 2:221094/131‑1 (MQ=255) ttGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGt > 1:118251/1‑149 (MQ=255) aaaatcaacggccggctttgacaggccgacgatttcccgcacacgtgcactgtttaTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCAtaaacagagatcg < 3:124910‑M1/93‑7 (MQ=255) aaaatcaacggccggctttgacaggccgacgatttcccgcaaacgtgcactgtttaTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACa > 4:124910‑M1/57‑142 (MQ=255) aaaCATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACgtgt > 1:145976/1‑149 (MQ=255) aaaCATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACgagt > 2:103190/1‑149 (MQ=255) aaCATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACgtgt < 2:145976/148‑1 (MQ=255) aTCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACGTGTGCgg < 2:118251/149‑1 (MQ=255) tcCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCa < 2:72069/137‑1 (MQ=255) tcCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCa > 1:72069/1‑137 (MQ=255) tcCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACGTGTGCGGGa > 5:72345/1‑148 (MQ=255) ccAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCTGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAg < 1:258444/132‑1 (MQ=255) ccAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAg > 2:258444/1‑132 (MQ=255) cAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACGTGTGCGGGaaa < 2:249649/148‑1 (MQ=255) cAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACGTGTGCGGGa < 4:59087/146‑1 (MQ=255) gATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACGTGTGCGGGAAAtcgt > 6:80895/1‑149 (MQ=255) cATTTGAGCTGCCGCAAGCTTGATGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACGTGTGCGGGAAAtcgtcg < 4:176516/148‑1 (MQ=255) cATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAg < 3:244951/78‑1 (MQ=255) cATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAg > 4:244951/1‑78 (MQ=255) ttGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTCAACGTGTGCGGGAAATCGTAGGcc > 8:173166/1‑149 (MQ=255) ggAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACGTGTGCGGGAAATCGTCGGCCt < 5:80895/148‑1 (MQ=255) gCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACGTGTGCGGGAAATCGTCGGCCTGt > 7:6111/1‑144 (MQ=255) gCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACGTGTGCGGGAAATCGTCGGCCTGt < 8:6111/144‑1 (MQ=255) cAAGCTTGCTGTCAAACACGAGGGGGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACGTGTGCGGGAAATCGTCGGCCTGTCAAAgccgg < 3:38815/149‑1 (MQ=255) aGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACGTGTGCGGGAAATCGTCGGCCTGTCAAAgccggcc < 5:189330/149‑1 (MQ=255) tCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACGTGTGCGGGAAATCGTCGGCCTGTCAAAGCCGGCCGTTGAtttt > 3:217837/1‑149 (MQ=255) aCAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACGTGTGCGGGAAATCGTCGGCCTGTCAAAGCCGGCCGTTGATTTTGCaa > 6:238389/1‑149 (MQ=255) | CAGGGCGCAGAGTACGTACTCTGAGGACTGGACCAGAGTGTCTTGCAGGAACTGGGTGGTATCGAGGGGTGGATCAGGGACCATCTTGCGCATAAACATCTCCAGGATCATTGGAGCTGCCGCAAGCTTGCTGTCAAACAAGAGGGTGGCAGCTGTACATGGGTTGACAGACCGAGGATCCCGGAGTAACTCGGCGCACACGAAGGTGCCCCACGTACAGCCGCCATAAACAGTGCACGTGTGCGGGAAATCGTCGGCCTGTCAAAGCCGGCCGTTGATTTTGCAA > NC_002947/1419812‑1420097 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |