New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2062163 =	45 (1.070)	3 (0.070)	3/246	NT	6.5%	coding (1078/2058 nt)	PP_1838	membrane protein
	?	NC_002947	2062226 =	44 (1.090)					coding (1141/2058 nt)	PP_1838	membrane protein

ATGGAAAGCTTCGCCGGCCATTCGGTTGGCGCGCTTGGCAGCCCCAACAACATCACCCCGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAGCGCCCGTGACTACGACGATGTGTACGTCTACAACGGCGACTTTGCCTGGGACAAC  >  NC_002947/2062016‑2062309                                                                                                                                                    |                                                                                                                                                   gttgacgaagtcattacggccgatgaaggtggtcatcccctggttgccgaagaacccggactggttgtcccaggcaaagtcgccgttgtagacgtacacatcgtcgtagtcacgggcgctgagcagggccggcaggcccgacagcttAt                                                                                                                                                   <  3:145029‑M1/2‑1 (MQ=255) aTGGAAAGCTTCGCCGGCCATTCGGTTGGCGCGCTTGGCAGCCCCAACAACATCACCCCGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCAt                                                                                                                                                   <  5:226578/149‑1 (MQ=255)  tGGAAAGCTTCGCCGGCCATTCGGTTGGCGCGCTTGGCAGCCCCAACAACATCACCCCGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCAt                                                                                                                                                   >  1:103702/1‑148 (MQ=255)  tGGAAAGCTTCGCCGGCCATTCGGTTGGCGCGCTTGGCAGCCCCAACAACATCACCCCGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCAt                                                                                                                                                   <  2:103702/148‑1 (MQ=255)   ggAAAGCTTCGCCGGCCATTCGGTTGGCGCGCTTGGCAGCCCCAACAACATCACCCCGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATgg                                                                                                                                                 >  1:235751/1‑149 (MQ=255)     aaaGCTTCGCCGGCCATTCGGTTGGCGCGCTTGGCAGCCCCAACAACATCACCCCGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGc                                                                                                                                                <  3:8121/148‑1 (MQ=255)        gCTTCGCCGGCCATTCGGTTGGCGCGCTTGGCAGCCCCAACAACATCACCCCGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGc                                                                                                                                            <  6:243247/149‑1 (MQ=255)            cGCCGGCCATTCGGTTGGCGCGCTTGGCAGCCCCAACAACATCACCCCGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTcc                                                                                                                                        >  3:93997/1‑149 (MQ=255)             gCCGGCCATTCGGTTGGCGCGCTTGGCAGCCCCAACAACATCACCCCGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTcc                                                                                                                                        <  8:10489/148‑1 (MQ=255)                ggCCATTCGGTTGGCGCGCTTGGCAGCCCCAACAACATCACCCCGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCaa                                                                                                                                    <  8:192219/149‑1 (MQ=255)                    aTTCGGTTGGCGCGCTTGGCAGCCCCAACAACATCACCCCGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGCCATGGTGGCGAACATGCCCTg                                                                                                                                             >  1:166871/1‑136 (MQ=255)                    aTTCGGTTGGCGCGCTTGGCAGCCCCAACAACATCACCCCGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGCCATGGTGGCGAACATGCCCTg                                                                                                                                             <  2:166871/136‑1 (MQ=255)                        ggTTGGCGCGCTTGGCAGCCCCAACAACATCACCCCGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCa                                                                                                                             <  2:235751/148‑1 (MQ=255)                             gcgcgcTTTGCAGCCCCAACTACTTCACCCCGTAGTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATTGCCTGCTTCCCCAACCTGCCAGGTTTc                                                                                                                       <  4:164116/149‑1 (MQ=255)                                          ccccAACAACATCACCCCGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATg                                                                                                           >  5:26619/1‑148 (MQ=255)                                            ccAACAACATCACCCCGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATg                                                                                                           >  1:12140/1‑146 (MQ=255)                                                    aTCACCCCGTACTTTGACAAGCTTGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCATGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGa                                                                                                <  3:25898/149‑1 (MQ=255)                                                          ccGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAggcgg                                                                                          >  3:26768/1‑149 (MQ=255)                                                          ccGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAggcgg                                                                                          <  6:26619/149‑1 (MQ=255)                                                          ccGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAggcgg                                                                                          >  1:246874/1‑149 (MQ=255)                                                               cTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATa                                                                                     <  7:130428/149‑1 (MQ=255)                                                                  tGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATaa                                                                                    <  5:104416/147‑1 (MQ=255)                                                                     cAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGt                                                                               <  4:93997/149‑1 (MQ=255)                                                                      ccaggcaaagtcgccgttgtagacgtacacatcgtcgtagtcacgggcgctgagcagggccggcaggcccgacagcttATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTc                                                                              >  4:145029‑M1/79‑149 (MQ=255)                                                                                  gccgttgtagacgtacacatcgtcgtagtcacgggcgctgagcagggccggcaggcccgacagcttATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCa                                                                                       <  4:49567‑M1/62‑1 (MQ=255)                                                                                  gccgttgtagacgtacacatcgtcgtagtcacgggcgctgagcagggccggcaggcccgacagcttATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCa                                                                                       >  3:49567‑M1/67‑128 (MQ=255)                                                                                   aagGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGcc                                                                 <  6:99529/149‑1 (MQ=255)                                                                                     ggCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCt                                                               >  8:123831/1‑149 (MQ=255)                                                                                       ccTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGc                                                             <  8:133709/149‑1 (MQ=255)                                                                                        ctgctgTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGc                                                                      <  5:248526/139‑1 (MQ=255)                                                                                        ctgctgTTCGACCGCTTCTTCTACAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGc                                                                      >  6:248526/1‑139 (MQ=255)                                                                                         tgctgTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCt                                                            >  1:34287/1‑148 (MQ=255)                                                                                           ctgTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCa                                                          <  2:246874/148‑1 (MQ=255)                                                                                              ttCGCCCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAgc                                                        <  5:150787/147‑1 (MQ=255)                                                                                              ttCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGcc                                                                 >  3:50740/1‑138 (MQ=255)                                                                                              ttCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGcc                                                                 <  4:54401/138‑1 (MQ=255)                                                                                              ttCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGcc                                                                 <  4:50740/138‑1 (MQ=255)                                                                                              ttCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGcc                                                                 >  3:54401/1‑138 (MQ=255)                                                                                              ttCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAgcgc                                                      >  6:153347/1‑149 (MQ=255)                                                                                                 gACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCTGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAGCGCCCg                                                   >  4:60244/1‑149 (MQ=255)                                                                                                     gCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAggcg                                                                                           >  6:91554/1‑105 (MQ=255)                                                                                                     gCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAggcg                                                                                           <  5:91554/105‑1 (MQ=255)                                                                                                             tcCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAGCGCCCGTGACTAcgacga                                       >  1:27857/1‑149 (MQ=255)                                                                                                                aaCGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAgcgc                                                      <  5:77098/131‑1 (MQ=255)                                                                                                                aaCGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAgcgc                                                      >  6:77098/1‑131 (MQ=255)                                                                                                                aaCGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAGCGCCCGTGACTACGACGAtgt                                    >  6:218953/1‑149 (MQ=255)                                                                                                                     cACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAGCGCCCGTGACTACGACGATGTGTACg                               <  5:218953/149‑1 (MQ=255)                                                                                                                             cccACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAGCGCCCGTGACTACGACGATGTGTACGTCTACAAc                       <  5:153347/149‑1 (MQ=255)                                                                                                                              ccaccaGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAGCGCCCGTGACTACGACGAt                                      <  6:207767/133‑1 (MQ=255)                                                                                                                              ccaccaGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAGCGCCCGTGACTACGACGAt                                      >  5:207767/1‑133 (MQ=255)                                                                                                                              ccaccaGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAGCGCCCGTGACTACGACGATGTGTACGTCTACAACg                      >  5:169793/1‑149 (MQ=255)                                                                                                                                  caGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAGCGCCCGTGACTACGACGATGTGTACGTCTACAACGGCGa                  <  2:34287/149‑1 (MQ=255)                                                                                                                                      gCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAGCGCCCGTGACTACGACGATGTGTACGTCTACAACGGCGACttt              <  2:27857/149‑1 (MQ=255)                                                                                                                                           ttCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAGCGCCCGTGACTACGACGATGTGTACGTCTACAACGGCGACTTTGCCTg         >  1:178709/1‑149 (MQ=255)                                                                                                                                                   caTGGCCTGCCTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAGCGCCCGTGACTACGACGATGTGTACGTCTACAACGGCGACTTTGCCTGGGACAAc  >  3:259988/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                   ATGGAAAGCTTCGCCGGCCATTCGGTTGGCGCGCTTGGCAGCCCCAACAACATCACCCCGTACTTTGACAAGCTGGCCAAAGAAGGCCTGCTGTTCGACCGCTTCTTCTCCAACGGCACCCATACCCACCAGGGCATGTTCGCCACCATGGCCTGCTTCCCCAACCTGCCAGGTTTCGAATACCTGATGCAGACCCCGGAAGGCGGCCATAAGCTGTCGGGCCTGCCGGCCCTGCTCAGCGCCCGTGACTACGACGATGTGTACGTCTACAACGGCGACTTTGCCTGGGACAAC  >  NC_002947/2062016‑2062309

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.