New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2609580 =	40 (0.950)	3 (0.070)	3/252	NT	7.6%	coding (721/2190 nt)	PP_2286	hypothetical protein
	?	NC_002947	2609637 =	34 (0.820)					coding (778/2190 nt)	PP_2286	hypothetical protein

CCTCATGAACGTGGTCGGGGATGTCACTGGGAACCAGTTCAACGGCACCACTGACCAGGCCGCCCAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGCGTCCACGCTGGGTGGCACTACCGCTGCCGAAGTGAGCCTCCACGCGCAGAGCATGGATGAC  >  NC_002947/2609432‑2609723                                                                                                                                                     |                                                                                                                                                cggcatccgcttgggtcaggaacgggcgaatctcatcatccacacgcttacgctggttctggtcatccatgctctgcgcgtggaggctcacttcggcagcggtagtgccacccagcgtggacgccacagtggcaccggatgacagcttc                                                                                                                                                 >  7:59440‑M1/149‑149 (MQ=255)        aaCGTGGTCGGGGATGTCACTGGGAACCAGTTCAACGGCACCACTGACCAGGCCGCCCAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTcc                                                                                                                                           <  2:52414/148‑1 (MQ=255)                        tCACTGGGAACCAGTTCAACGGCACCACTGACCAGGCCGCCCAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGATGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCggg                                                                                                                          <  5:218393/149‑1 (MQ=255)                        tCACTGGGAACCAGTTCAACGGCACCACTGACCAGGCCGCCCAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCgg                                                                                                                           >  1:181928/1‑148 (MQ=255)                          aCTGGGAACCAGTTCAACGGCACCACTGACCAGGCCGCCCAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGaa                                                                                                                        >  5:168667/1‑149 (MQ=255)                          aCTGGGAACCAGTTCAACGGCACCACTGACCAGGCCGCCCAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGaa                                                                                                                        <  5:131228/149‑1 (MQ=255)                              ggAACCAGTTCAACGGCACCACTGACCAGGCCGCCCAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCgcgc                                                                                                                                  >  4:109279/1‑135 (MQ=255)                              ggAACCAGTTCAACGGCACCACTGACCAGGCCGCCCAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCgcgc                                                                                                                                  <  3:109279/135‑1 (MQ=255)                              ggAACCAGTTCAACGGCACCACTGACCAGGCCGCCCAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAg                                                                                                                    >  2:142637/1‑149 (MQ=255)                                   cAGTTCAACGGCACCACTGACCAGGCCGCCCAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCt                                                                                                               >  1:122066/1‑149 (MQ=255)                                    tcatccacacgcttacgctggttctggtcatccatgctctgcgcgtggaggctcacttcggcagcggtagtgccacccagcgtggacgccacagtggcaccggatgacagcttCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCtg                                                                                                              <  4:79517‑M1/36‑1 (MQ=255)                                    aGTTCAACGGCACCACTGACCAGGCCGCCCAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCtg                                                                                                              <  7:185234/149‑1 (MQ=255)                                    aGTTCAACGGCACCACTGACCAGGCCGCCCAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCtg                                                                                                              <  3:190639/149‑1 (MQ=255)                                                    tGACCAGGCCGCCCAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCgg                                                                                                                           <  2:249480/120‑1 (MQ=255)                                                    tGACCAGGCCGCCCAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCgg                                                                                                                           >  1:249480/1‑120 (MQ=255)                                                     gACCAGGCCGCCCAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGc                                                                                             >  6:23154/1‑149 (MQ=255)                                                             cgccCAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGc                                                                                     >  7:17374/1‑149 (MQ=255)                                                              gtcatccatgctctgcgcgtggaggctcacttcggcagcggtagtgccacccagcgtggacgccacagtggcaccggatgacagcttCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAg                                                                                      >  3:79517‑M1/88‑147 (MQ=255)                                                              gtcatccatgctctgcgcggggaggctcacttcggcagcggtagtgccacccagcgtggacgccacagtggcaccggatgacagcttCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGaa                                                                                       >  7:94663‑M1/88‑146 (MQ=255)                                                               cccAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTg                                                                                   >  6:247233/1‑149 (MQ=255)                                                                ccAGGGCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGt                                                                                  >  4:151127/1‑149 (MQ=255)                                                                ccAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGt                                                                                  <  8:229281/149‑1 (MQ=255)                                                                    gCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATc                                                                              >  8:67921/1‑149 (MQ=255)                                                                       aTCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCgg                                                                           <  3:151127/149‑1 (MQ=255)                                                                        tCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGt                                                                          <  7:67921/149‑1 (MQ=255)                                                                          gCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGc                                                                        <  2:181928/149‑1 (MQ=255)                                                                                 gATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACtgtg                                                                 <  5:23154/149‑1 (MQ=255)                                                                                  aTTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCACATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGaa                                                                                       >  3:252320/1‑126 (MQ=255)                                                                                    tCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGc                                                               <  2:122066/148‑1 (MQ=255)                                                                                               tcgtcCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGCGTCCACGCTg                                                     <  6:168667/147‑1 (MQ=255)                                                                                                  tcCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGCGTCCACGCTGGGTgg                                                <  5:247233/149‑1 (MQ=255)                                                                                                            tACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGCGTCCACGCTGGGTGGCACTACCGCt                                      >  1:216290/1‑149 (MQ=255)                                                                                                              cTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTgg                                                                                              >  7:40511/1‑91 (MQ=255)                                                                                                               tCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGCGTCCACGCTGGGTGGCACTACCGCTGcc                                   >  7:115522/1‑149 (MQ=255)                                                                                                                    gACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGCGTCCACGCTGGGTGGCACTACCGCTGCCGAAGt                              >  5:108761/1‑149 (MQ=255)                                                                                                                      cGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGCGTCCACGCTGGGTGGCACTACCGCTGCCGAAGTGa                            <  1:142637/149‑1 (MQ=255)                                                                                                                           cccGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGCGTCCACGCTGGGTGGCACTACCGCTGCCGAAGTGAGCCTc                       >  4:152114/1‑149 (MQ=255)                                                                                                                             cGCAAGACCACCTTGAACTACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGCGTCCACGCTGGGTGGCACTACCGCTGCCGAAGTGAGCCTCCa                     <  8:17374/149‑1 (MQ=255)                                                                                                                             cGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGCGTCCACGCTGGGTGGCACTACCGCTGCCGAAGt                              >  4:5996/1‑140 (MQ=255)                                                                                                                             cGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGCGTCCACGCTGGGTGGCACTACCGCTGCCGAAGt                              <  3:5996/140‑1 (MQ=255)                                                                                                                                 aGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGCGTCCACGCTGGGTGGCACTACCGCTGCCGAAGTGAGCCTCCAcgcg                 <  1:243409/149‑1 (MQ=255)                                                                                                                                           gAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGCGTCCACGCTGGGTGGCACTACCGCTGCCGAAGTGAGCCTCCACGCGCAGAGCAt         <  2:216290/147‑1 (MQ=255)                                                                                                                                            aacaacACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGCGTCCACGCTGGGTGGCACTACCGCTGCCGAAGTGAGCCTCCACGCGCAGAGCATgg       <  8:115522/148‑1 (MQ=255)                                                                                                                                               aacaCGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGCGTCCACGCTGGGTGGCACTACCGCTGCCGAAGTGAGCCTCCACGCGCAGAGCATGGATGa   >  2:68178/1‑149 (MQ=255)                                                                                                                                                acacGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGCGTCCACGCTGGGTGGCACTACCGCTGCCGAAGTGAGCCTCCACGCGCAGAGCATGGATGAc  <  3:152114/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                CCTCATGAACGTGGTCGGGGATGTCACTGGGAACCAGTTCAACGGCACCACTGACCAGGCCGCCCAGGCCATCGCCAGTCGATTCAACCTTCTGTCGTCCACCTCGCTACTCCGGGACGATGCCCGCAAGACCACCTTGAACAACACGCTGGTCCAGATCGCGCAGACCGGGAACAAGTCCCTGGTGGACGCGCTCCTGGCTCAGAAGCTGTCATCCGGTGCCACTGTGGCGTCCACGCTGGGTGGCACTACCGCTGCCGAAGTGAGCCTCCACGCGCAGAGCATGGATGAC  >  NC_002947/2609432‑2609723

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.