New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4880260 =	32 (0.760)	4 (0.100)	3/242	NT	13.6%	coding (870/1341 nt)	PP_4289	membrane protein
	?	NC_002947	4880298 =	21 (0.530)					coding (908/1341 nt)	PP_4289	membrane protein

CGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAG  >  NC_002947/4880112‑4880405                                                                                                                                                     |                                                                                                                                                   gcagcggcctgggccggtgcttgcgcaggtgcggcgggtgcttcggcagccttggcggcgtcctcggcacgctgctcggcagccgtcttgccgcctaccgcagttgccggcagcggctggtactcgatcttcgctgcggcttgctcagg                                                                                                                                                    >  5:7275‑M1/149‑149 (MQ=255)      ggcctgggccggtgcttgcgcaggtgcggcgggtgcttcggcagccttggcggcgtcctcggcacgctgctcggcagccgtcttgccgcctaccgcagttgccggcagcggctggtactcgatcttcgctgcggcttgctcagGGCTTa                                                                                                                                               <  5:10284‑M1/6‑1 (MQ=255)        cctgggccggtgcttgcgcaggtgcggcgggtgcttcggcagccttggcggcgtcctcggcacgctgctcggcagccgtcttgccgcctaccgcagttgccggcagcggctggtactcgatcttcgctgcggcttgctcagGGCTTACg                                                                                                                                             >  3:232534‑M1/142‑149 (MQ=255)                 ccAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGcc                                                                                                                                    >  4:155165/1‑149 (MQ=255)                   aGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGccc                                                                                                                                   >  5:180071/1‑148 (MQ=255)                        aaCTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAAcc                                                                                                                             >  7:21460/1‑149 (MQ=255)                          cTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGa                                                                                                                           <  4:146145/149‑1 (MQ=255)                             gCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCTCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGAtt                                                                                                                         <  4:183532/148‑1 (MQ=255)                             gCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTg                                                                                                                        <  4:51129/149‑1 (MQ=255)                                 aTCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCACCACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGcc                                                                                                                      <  3:141684/147‑1 (MQ=255)                                     tGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGc                                                                                                                >  6:153394/1‑149 (MQ=255)                                     tGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGc                                                                                                                >  5:4159/1‑149 (MQ=255)                                      gtgcgtcggcagccttggcggcgtcctcggcacgctgctcggcagccgtcttgccgcctaccgcagttgcaggcagcggctggtactcgatcttcgctgcggcttgctcagGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGcc                                                                                                               >  5:192616‑M1/112‑149 (MQ=255)                                        ccGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCt                                                                                                             <  6:4159/149‑1 (MQ=255)                                         cttcggcagccttggcggcgtcctcggcacgctgctcggcagccgtcttgccgcctaccgcagttgccggcagcggctggtactcgatcttcgctgcggcttgctcagGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCt                                                                                                             >  6:10284‑M1/109‑148 (MQ=255)                                          ttcggcagccttggcggcgtcctcggcacgctgctcggcagccgtcttgccgcctaccgcagttgccggcagcggctggtactcgatcttcgctgcggcttgctcagGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCt                                                                                                             <  6:170837‑M1/40‑1 (MQ=255)                                          ttcggcagccttggcggcgtcctcggcacgctgctcggcagccgtcttgccgcctaccgcagttgccggcagcggctggtactcgatcttcgctgcggcttgctcagGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCt                                                                                                             >  5:170837‑M1/108‑147 (MQ=255)                                          ggTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGa                                                                                                           <  3:155165/149‑1 (MQ=255)                                          ggTATCGCAGTAGCCGCGGTGCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGa                                                                                                           <  3:207747/149‑1 (MQ=255)                                                                   tCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTg                                                                                                                        >  1:174311/1‑111 (MQ=255)                                                                   tCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTg                                                                                                                        <  2:174311/111‑1 (MQ=255)                                                                             ctTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCt                                                                          <  5:22470/147‑1 (MQ=255)                                                                              ttCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGa                                                                                      >  4:95738/1‑134 (MQ=255)                                                                              ttCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGa                                                                                      <  3:95738/134‑1 (MQ=255)                                                                                      ccGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGc                                                                              >  6:53723/1‑134 (MQ=255)                                                                                      ccGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGc                                                                              <  5:53723/134‑1 (MQ=255)                                                                                      ccGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTg                                                               <  8:21460/149‑1 (MQ=255)                                                                                      ccGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCCTCGGCGCTCTGGCCATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGACGTaa                                                                                                                  >  6:106988/1‑98 (MQ=255)                                                                                               cAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAggcg                                                      <  1:29959/149‑1 (MQ=255)                                                                                                  caacaaGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAggcggc                                                    >  7:105018/1‑148 (MQ=255)                                                                                                           cGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCt                                           <  6:180071/148‑1 (MQ=255)                                                                                                                         ccGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGcc                           >  2:153231/1‑149 (MQ=255)                                                                                                                           gTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGa                         <  4:168349/149‑1 (MQ=255)                                                                                                                           gTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCAGa                         <  5:153394/149‑1 (MQ=255)                                                                                                                               gcgcTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTATGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGAc                     <  6:172465/149‑1 (MQ=255)                                                                                                                                     tGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGACTG‑CCGAGCAGCGTGCCGAGGAcgccgc                >  4:136613/1‑148 (MQ=255)                                                                                                                                        cGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAg            >  7:83337/1‑149 (MQ=255)                                                                                                                                         gatgatCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGACCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAgg           >  2:130343/1‑149 (MQ=255)                                                                                                                                          atgatCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCCGAGCAGCGTGCCGAGGACGCCGCCAAgg           <  1:153231/149‑1 (MQ=255)                                                                                                                                                tGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGa                                                                                                           <  2:68521/47‑1 (MQ=255)                                                                                                                                                tGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGa                                                                                                           >  1:68521/1‑47 (MQ=255)                                                                                                                                                  ccTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAg  >  8:58721/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAG  >  NC_002947/4880112‑4880405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.