New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4880260 =	32 (0.760)	4 (0.100)	3/242	NT	13.6%	coding (870/1341 nt)	PP_4289	membrane protein
	?	NC_002947	4880298 =	21 (0.530)					coding (908/1341 nt)	PP_4289	membrane protein

CCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGC  >  NC_002947/4880151‑4880445                                                                                                                                                    |                                                                                                                                                     ccGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCt                                                                                                                                                     <  6:4159/149‑1 (MQ=255)  cttcggcagccttggcggcgtcctcggcacgctgctcggcagccgtcttgccgcctaccgcagttgccggcagcggctggtactcgatcttcgctgcggcttgctcagGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCt                                                                                                                                                     >  6:10284‑M1/109‑148 (MQ=255)   ttcggcagccttggcggcgtcctcggcacgctgctcggcagccgtcttgccgcctaccgcagttgccggcagcggctggtactcgatcttcgctgcggcttgctcagGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCt                                                                                                                                                     <  6:170837‑M1/40‑1 (MQ=255)   ttcggcagccttggcggcgtcctcggcacgctgctcggcagccgtcttgccgcctaccgcagttgccggcagcggctggtactcgatcttcgctgcggcttgctcagGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCt                                                                                                                                                     >  5:170837‑M1/108‑147 (MQ=255)   ggTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGa                                                                                                                                                   <  3:155165/149‑1 (MQ=255)   ggTATCGCAGTAGCCGCGGTGCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGa                                                                                                                                                   <  3:207747/149‑1 (MQ=255)                                      ctTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCt                                                                                                                  <  5:22470/147‑1 (MQ=255)                                       ttCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGa                                                                                                                              <  3:95738/134‑1 (MQ=255)                                       ttCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGa                                                                                                                              >  4:95738/1‑134 (MQ=255)                                               ccGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGc                                                                                                                      >  6:53723/1‑134 (MQ=255)                                               ccGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGc                                                                                                                      <  5:53723/134‑1 (MQ=255)                                               ccGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTg                                                                                                       <  8:21460/149‑1 (MQ=255)                                                        cAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAggcg                                                                                              <  1:29959/149‑1 (MQ=255)                                                           caacaaGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAggcggc                                                                                            >  7:105018/1‑148 (MQ=255)                                                                    cGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCt                                                                                   <  6:180071/148‑1 (MQ=255)                                                                                  ccGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGcc                                                                   >  2:153231/1‑149 (MQ=255)                                                                                    gTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGa                                                                 <  4:168349/149‑1 (MQ=255)                                                                                    gTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCAGa                                                                 <  5:153394/149‑1 (MQ=255)                                                                                        gcgcTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTATGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGAc                                                             <  6:172465/149‑1 (MQ=255)                                                                                              tGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGACTG‑CCGAGCAGCGTGCCGAGGAcgccgc                                                        >  4:136613/1‑148 (MQ=255)                                                                                                 cGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAg                                                    >  7:83337/1‑149 (MQ=255)                                                                                                  gatgatCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGACCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAgg                                                   >  2:130343/1‑149 (MQ=255)                                                                                                   atgatCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCCGAGCAGCGTGCCGAGGACGCCGCCAAgg                                                   <  1:153231/149‑1 (MQ=255)                                                                                                         tGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGa                                                                                                                                                   <  2:68521/47‑1 (MQ=255)                                                                                                         tGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGa                                                                                                                                                   >  1:68521/1‑47 (MQ=255)                                                                                                           ccTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAg                                          >  8:58721/1‑149 (MQ=255)                                                                                                            agggcttacggcaatcggtttcgggccggtaacgtaagccCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGaa                                           >  5:170837‑M2/41‑147 (MQ=255)                                                                                                            agggcttacggcaatcggtttcgggccggtaacgtaagccCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGaa                                           <  6:170837‑M2/107‑1 (MQ=255)                                                                                                            agggcttacggcaatcggtttcgggccggtaacgtaagccCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAg                                          >  6:10284‑M2/41‑148 (MQ=255)                                                                                                              ggcttacggcaatcggtttcgggccggtaacgtaagccCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCTGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGACGCAc                                       >  5:192616‑M2/39‑149 (MQ=255)                                                                                                                   ACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGc                                         <  7:95393‑M1/142‑1 (MQ=255)                                                                                                                   ACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGc                                         >  8:95393‑M1/1‑142 (MQ=255)                                                                                                                     GTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACccgccg                                 <  1:179196‑M1/148‑1 (MQ=255)                                                                                                                           ggCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCTGCACCTgc                          <  7:58721/149‑1 (MQ=255)                                                                                                                               cGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTgcgc                        >  8:2597/1‑147 (MQ=255)                                                                                                                                 aaaCCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAg                     >  6:212818/1‑148 (MQ=255)                                                                                                                                            cgtaagccCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAgg         >  3:232534‑M2/9‑149 (MQ=255)                                                                                                                                              taagccCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGcc       <  5:10284‑M2/143‑1 (MQ=255)                                                                                                                                                   cCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGc  >  5:7275‑M2/2‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTG‑CCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCGAAGCACCCGCCGCACCTGCGCAAGCACCGGCCCAGGCCGCTGC  >  NC_002947/4880151‑4880445

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.