New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 489357936 (0.850)4 (0.120) 4/204 NT 11.9% intergenic (+54/‑154) pyk/PP_4302 pyruvate kinase/urea transporter
?NC_002947 = 4893604 31 (0.930)intergenic (+79/‑129) pyk/PP_4302 pyruvate kinase/urea transporter

GCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCAC  >  NC_002947/4893433‑4893722
                                                                                                                                                   |                                                                                                                                               
gCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGc                                                                                                                                                <  1:146412/148‑1 (MQ=255)
      cGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTg                                                                                                                                         <  4:160817/149‑1 (MQ=255)
              cacGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAgg                                                                                                                                 <  3:251226/149‑1 (MQ=255)
                      tgATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAg                                                                                                                         >  3:44023/1‑149 (MQ=255)
                             cGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctgt                                                                                                                  >  1:249684‑M2/1‑143 (MQ=255)
                                  gCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCCCGCTGGCACAAGGGAATGCAGTccctgtgg                                                                                                                <  1:215319‑M2/147‑9 (MQ=255)
                                  gCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGactgcattcccttgtgccagcgtggccctgtggga                                                                                                              <  7:96019‑M1/148‑36 (MQ=255)
                                  gCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctgtggga                                                                                                              >  3:109299‑M2/1‑138 (MQ=255)
                                    gTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGactgcattcccttgtgccagcgtggccctgtgg                                                                                                                >  6:112486‑M1/1‑111 (MQ=255)
                                    gTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGactgcattcccttgtgccagcgtggccctgtgg                                                                                                                <  5:112486‑M1/144‑34 (MQ=255)
                                          ttCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctgtgggagcggccttg                                                                                                     <  7:65442‑M2/149‑20 (MQ=255)
                                             ggCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGactgcattcccttgtgccagcgtggccctgtgggagcggccttgtgt                                                                                                  <  5:66094‑M1/149‑48 (MQ=255)
                                               cAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACCGGGCCACGCTGGCACAAGGGAATGCAGTccctgtgggagcggccttgtgtcg                                                                                                <  7:85407‑M2/149‑25 (MQ=255)
                                               cAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctgtgggagcggccttgtgtcg                                                                                                >  5:270614‑M2/1‑125 (MQ=255)
                                                  gCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctg                                                                                                                   >  7:121709‑M2/1‑122 (MQ=255)
                                                  gCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctg                                                                                                                   >  7:253465‑M2/1‑122 (MQ=255)
                                                  gCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctg                                                                                                                   <  8:253465‑M2/127‑6 (MQ=255)
                                                  gCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctg                                                                                                                   <  8:121709‑M2/127‑6 (MQ=255)
                                                    cGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTATCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGAtt                                                                                           >  2:68098/1‑149 (MQ=255)
                                                         aCGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAgg                                                                                      >  2:14490/1‑149 (MQ=255)
                                                           gACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCCCAGGGCCACGCTGGCCCAAGGGAATGCAGTccctggggggggggccttgtgtcgcgagt                                                                                           <  2:220227‑M2/142‑30 (MQ=255)
                                                           gACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACCGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGAtt                                                                                           <  1:220227/142‑1 (MQ=255)
                                                                acacGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctgtggga                                                                                                              <  6:144058‑M2/118‑11 (MQ=255)
                                                                acacGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctgtggga                                                                                                              >  5:144058‑M2/1‑108 (MQ=255)
                                                                    gcggCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGccctc                                                                           <  6:70676/146‑1 (MQ=255)
                                                                          gATCGAGACTTTTCTCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGccctccct                                                                        <  7:197555/146‑1 (MQ=255)
                                                                          gATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCACCCACAGGGCCACGCAGGCACAAAGGAAAGCAGTACCAGTGGGGGCGGCCTTGTGTGGCGATTGGAGGGCAAACcccaccca                                                                        >  8:197555/1‑145 (MQ=37)
                                                                               agaCTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCg                                                                <  7:115179/149‑1 (MQ=255)
                                                                               agaCTTTGATCTGACATTGCCGGGGGCGCGTGGCGCCCCTTGCGCGCCACACGGCCGCACCCACAGGGCCACGCTGCCACAAGGGAATGCAGGCCCTGGGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCg                                                                <  3:78794/149‑1 (MQ=38)
                                                                                        tCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATg                                                                                                                            >  6:224328/1‑80 (MQ=255)
                                                                                        tCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATg                                                                                                                            <  5:224328/80‑1 (MQ=255)
                                                                                        tCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCGGGCCCAAGGGCATGCAGTCCCTGTGGGCGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCGGAATACCGCTCTACCCg                                                       >  2:59992/1‑149 (MQ=39)
                                                                                              aTTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTACCACAGGGCCACCCTGGCACAAGGGAATGCAGTCCCGGTGGGAGCGGCCGTGTGTAGCGATTTGAGGGCAAAGCCCTACCGGAATAACCCAAAACCCGACcgcg                                                 >  8:236879/1‑149 (MQ=37)
                                                                                                cgaaaggggCGCAACGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCACTACCCGACCGCgg                                                >  5:230024/6‑148 (MQ=39)
                                                                                                  ccGGGGGCGCGTTGCGCCCCGTGCGCTACACACGGCCCCTCCCAAAGGGCCACGCTGGCACAAGGTAATGCAGACCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGaaa                                             <  3:200899/149‑1 (MQ=38)
                                                                                                                gcgcCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCACTACCCGACCGCGGAAAACCGAGGCCCaaa                                <  6:230024/149‑1 (MQ=255)
                                                                                                                    cccTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAgg                            <  1:14490/149‑1 (MQ=255)
                                                                                                                       tttCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAg                                                                                                                                  >  3:146169/1‑44 (MQ=255)
                                                                                                                       tttCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAg                                                                                                                                  <  4:146169/44‑1 (MQ=255)
                                                                                                                       actcgCGACACAAGGCCCCCCCCCCAGGGactgcattcccttgggccagcgtggccctgggggagcggccttgtgtcgcgaaaggggcgcaacgcgcccccggcaatctcagatcaaagtctcgatccgcagcgtgttagtc                                <  2:220227‑M1/140‑114 (MQ=255)
                                                                                                                          cgcgACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCAc                       <  8:65442/148‑1 (MQ=255)
                                                                                                                            cgACACAAGGCCGCTCCCACAGGGactgcattcccttgtgccagcgtggccctgtgggagcggccttgtgtcgcgaaaggggcgcaacgcgcccccggcaatctcagatcaaagtctcgatccgcagcgtgttagtcgtacccggcttg                    >  5:270614‑M1/1‑24 (MQ=255)
                                                                                                                            cgACACAAGGCCGCTCCCACAGGGactgcattcccttgtgccagcgtggcccggtgggagcggccttgtgtcgcgaaaggggcgcaacgcgcccccggcaatctcagatcaaagtctcgatccgcagcgtgttagtcgtacccggcttg                    <  7:85407‑M1/149‑126 (MQ=255)
                                                                                                                              acacAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGTAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTc                  <  7:236879/149‑1 (MQ=255)
                                                                                                                              acacAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctgtgggagcggccttgtgtcgcgaaaggggcgcaacgcgcccccggcaatctcagatcaaagtctcgatccgcagcgtgttagtcgtacccggcttgcc                  <  5:66094‑M2/149‑103 (MQ=255)
                                                                                                                                acaAGGCCGGTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTccc                <  8:85407/149‑1 (MQ=255)
                                                                                                                                 caAGGCCGCTCCCACAGGGactgcattcccttgtgccagcgtggccctgtgggagcggccttgtgtcgcgaaaggggcgcaacgcgcccccggcaatctcagatcaaagtctcgatccgcagcgtgttagtcgtacccggcttgccgaa               <  7:65442‑M1/149‑131 (MQ=255)
                                                                                                                                  aaGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAg                                       >  2:199522/1‑124 (MQ=255)
                                                                                                                                  aaGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAg                                       <  1:199522/124‑1 (MQ=255)
                                                                                                                                    ggCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTccccc              <  2:31215/147‑1 (MQ=255)
                                                                                                                                    ggCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTccccc              >  1:31215/1‑147 (MQ=255)
                                                                                                                                        gCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAAc        <  4:44023/149‑1 (MQ=255)
                                                                                                                                          tCCCACAGGGactgcattcccttgtgccagcgtggccctgtgggagcggccttgtgtcgcgaaaggggcgcaacgcgcccccggcaatctcagatcaaagtctcgatccgcagcgtgttagtcgtacccggcttgccgaaaggcacgc       >  3:109299‑M1/1‑10 (MQ=255)
                                                                                                                                          tCCCACAGGGactgcattcccttgtgccagcgtggccctgtgggagcggccttgtgtcgcgaaaggggcgcaacgcgcccccggcaatctcagatcaaagtctcgatccgcagcgtgt                                     >  5:144058‑M1/1‑10 (MQ=255)
                                                                                                                                          tCCCACAGGGactgcattcccttgtgccagcgtggccctgtgggagcggccttgtgtcgcgaaaggggcgcaacgcgcccccggcaatctcagatcaaagtctcgatccgcagcgtgt                                     <  6:144058‑M1/118‑109 (MQ=255)
                                                                                                                                          tCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctgtgggagcggccttgtgtcgcgaaaggggcgcaacgcgcccccggcaatctcagatcaaagtctcgatccgcagcgtgttagtcgtacccggcttgccgaaaggcacgc       <  7:96019‑M2/148‑114 (MQ=255)
                                                                                                                                           cccACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTc     <  1:68098/149‑1 (MQ=255)
                                                                                                                                           cccACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTc     >  7:196514/1‑149 (MQ=255)
                                                                                                                                            ccACAGGGactgcattcccttgtgccagcggggccctgtgggagcggccttgtgtcgcgaaaggggcgcaacgcgccccccggcaatctcagatcaaagtctcgatccgcagcgtgttagtcgtacccggcttgccgaaaggcacgc      <  1:215319‑M1/147‑140 (MQ=255)
                                                                                                                                            ccACAGGGCCACGCTGGCACAAGGGAATGCAGTccctgtgggagcggccttgtgtcgcgaaaggggcgcaacgcgcccccggcaatctcagatcaaagtctcgatccgcagcgtgttagtcgtacccggcttgccgaaaggcac         >  6:112486‑M2/1‑33 (MQ=255)
                                                                                                                                            ccACAGGGCCACGCTGGCACAAGGGAATGCAGTccctgtgggagcggccttgtgtcgcgaaaggggcgcaacgcgcccccggcaatctcagatcaaagtctcgatccgcagcgtgttagtcgtacccggcttgccgaaaggcac         <  5:112486‑M2/144‑112 (MQ=255)
                                                                                                                                            ccACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAAcc                                          >  7:213050/1‑111 (MQ=255)
                                                                                                                                            ccACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAAcc                                          <  8:213050/111‑1 (MQ=255)
                                                                                                                                            ccACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGAACGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTc     >  6:254427/1‑148 (MQ=255)
                                                                                                                                             cacaGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCg                                                                >  6:196736/1‑88 (MQ=255)
                                                                                                                                             cacaGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCg                                                                <  5:196736/88‑1 (MQ=255)
                                                                                                                                              acaGGGactgcattcccttgtgccagcgtggccctgtgggagcggccttgtgtcgcgaaaggggcgcaacgcgcccccggcaatctcagatcaaagtctcgatccgcagcgtgttagtcgtacccggcttgccgaaaggcacgccagcg  >  1:249684‑M1/1‑6 (MQ=255)
                                                                                                                                               caGGGactgcattcccttgtgccagcgtggccctgtgggagcggccttgtgtcgcgaaaggggcgcaacgcgcccccggcaatctcagatcaaagtctcgatccgcagcgtgttagtcgtacccggc                       <  8:253465‑M1/127‑123 (MQ=255)
                                                                                                                                               caGGGactgcattcccttgtgccagcgtggccctgtgggagcggccttgtgtcgcgaaaggggcgcaacgcgcccccggcaatctcagatcaaagtctcgatccgcagcgtgttagtcgtacccggc                       <  8:121709‑M1/127‑123 (MQ=255)
                                                                                                                                               caGGGactgcattcccttgtgccagcgtggccctgtgggagcggccttgtgtcgcgaaaggggcgcaacgcgcccccggcaatctcagatcaaagtctcgatccgcagcgtgttagtcgtacccggc                       >  7:121709‑M1/1‑5 (MQ=255)
                                                                                                                                               caGGGactgcattcccttgtgccagcgtggccctgtgggagcggccttgtgtcgcgaaaggggcgcaacgcgcccccggcaatctcagatcaaagtctcgatccgcagcgtgttagtcgtacccggc                       >  7:253465‑M1/1‑5 (MQ=255)
                                                                                                                                                   |                                                                                                                                               
GCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCAC  >  NC_002947/4893433‑4893722

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.