New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3276877	46 (1.090)	3 (0.070)	3/250	NT	5.7%	intergenic (‑182/+101)	PP_2875/ampC	hypothetical protein/beta‑lactamase
	?	NC_002947	= 3276906	54 (1.320)					intergenic (‑211/+72)	PP_2875/ampC	hypothetical protein/beta‑lactamase

GCATCGCAACAGGGGCTTTCTCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGC‑GCCTGGTTGGGGTAATTCCGATTGGCCAGCAGCAC  >  NC_002947/3276759‑3277052                                                                                                                                                    |                                                                                                                                                    gCATCGCAACAGGGGCTTTCTCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGc                                                                                                                                                    <  6:104591‑M2/149‑2 (MQ=255)  cATCGCAACAGGGGCTTTCTCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGcg                                                                                                                                                   <  2:162897‑M2/149‑3 (MQ=255)      gCAACAGGGGCTTTCTCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCaa                                                                                                                                               <  6:213207/149‑1 (MQ=255)      gCAACAGGGGCTTTCTCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCaa                                                                                                                                               <  7:222381/149‑1 (MQ=255)              ggCTTTCTCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTg                                                                                                                                       <  1:162897/149‑1 (MQ=255)                     tcACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAg                                                                                                                                    >  1:74593/1‑145 (MQ=255)                     tcACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAg                                                                                                                                    <  2:74593/145‑1 (MQ=255)                               ttttGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCt                                                                                                                      >  5:212200/1‑149 (MQ=255)                                        gTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACAtt                                                                                                             <  6:84666/149‑1 (MQ=255)                                         tttCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTc                                                                                                            >  3:244829/1‑149 (MQ=255)                                             ccTCTCCACGGACGGCCTGCGTTACCGCGCTGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTc                                                                                                        <  5:16903/149‑1 (MQ=255)                                             ccTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTc                                                                                                        >  3:93272/1‑149 (MQ=255)                                                   cACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGTAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGtttt                                                                                                   <  5:112557/148‑1 (MQ=255)                                                    acggacggCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGt                                                                                                 <  5:104591/149‑1 (MQ=255)                                                      ggacggCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGt                                                                                                         <  8:110450/139‑1 (MQ=255)                                                      ggacggCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGt                                                                                                         >  7:110450/1‑139 (MQ=255)                                                      ggacggCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTcc                                                                                               <  5:230318/149‑1 (MQ=255)                                                       gacggCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTcc                                                                                               >  1:80026/1‑148 (MQ=255)                                                               gCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATc                                                                                        >  8:213152/1‑147 (MQ=255)                                                               gCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATc                                                                                        <  7:213152/147‑1 (MQ=255)                                                                 gcggtaacgcAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCCTGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAAcg                                                                                    >  5:16076/8‑149 (MQ=255)                                                                 gTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGt                                                                                                                                   <  1:145504/102‑1 (MQ=255)                                                                 gTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGt                                                                                                                                   >  2:145504/1‑102 (MQ=255)                                                                  ttACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAAcgc                                                                                   <  3:133830/149‑1 (MQ=255)                                                                      cgcgCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGc                                                                               >  2:253002/1‑149 (MQ=255)                                                                          cAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCCTGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTta                                                                           <  6:16076/149‑1 (MQ=255)                                                                               cGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGc                                                                      <  1:253002/149‑1 (MQ=255)                                                                                 tCTGGAAAACCCTTCCCACAGCTCCCGATCGGGGAGACGTCTTCATCATGCCAAAGCGCGATGAAAGGCGACAACCATTTTGTAGTGAATATTTATGCTCACTACATTCTCTCGTTTTGTCCTACAATCAACGCGAGCGTTATAAccct                                                                    >  8:110019/1‑148 (MQ=255)                                                                                   tGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCgg                                                                   >  4:255806/1‑148 (MQ=255)                                                                                     gAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCgg                                                                   <  3:255806/146‑1 (MQ=255)                                                                                     gAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGa                                                                  >  1:251098/1‑147 (MQ=255)                                                                                        cacCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGa                                                             <  6:233539/149‑1 (MQ=255)                                                                                             ttGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGtt                                                                            <  2:178131/129‑1 (MQ=255)                                                                                             ttGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGtt                                                                            >  1:178131/1‑129 (MQ=255)                                                                                             ttGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTc                                                         >  4:110174/1‑148 (MQ=255)                                                                                                ccACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAg                                                     >  6:43639/1‑149 (MQ=255)                                                                                                   ccGCTCCCGATCGGGGAGACGGATTCATCATGCCCAAGCGCGATGAACGCCGTCAACCAATATGTAGTGAAGATTTTTGCTCACTACATTCTGTCGTTTTCTCCGACAATCAAAGCGAGCGTTATAAGCAGGAAAGGATGTCGAAgccg                                                  >  3:139927/1‑149 (MQ=255)                                                                                                      cTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCt                                               >  7:217209/1‑149 (MQ=255)                                                                                                         ccGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGcc                                                                     <  4:221933/124‑1 (MQ=255)                                                                                                         ccGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCtt                                              <  6:212200/147‑1 (MQ=255)                                                                                                          cGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAggcggc                                                >  4:40979/1‑144 (MQ=255)                                                                                                          cGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAggcggc                                                <  3:40979/144‑1 (MQ=255)                                                                                                            aTCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAAcc                                         <  4:244829/149‑1 (MQ=255)                                                                                                             tCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGcgtctccccgatcgggagcggtggcaagggtgttccagacggcctgcgcggtaacgcaggccgtccgtggagagggaaactgtccaaaaggcagcgtgagaaagcccct                                        <  1:164300‑M2/149‑110 (MQ=255)                                                                                                                gggAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCcgc‑g                                    >  4:137546/1‑149 (MQ=255)                                                                                                                 ggAGACGGCTTCATCATGCCCAAGCGCGATGAACGGcgtctccccgatcgggagcggtggcaagggtgttccagacggcctgcgcggtaacgcaggccgtccgtggagagggaaactgtccaaaaggcagcgtga                                                  >  4:65733‑M2/1‑36 (MQ=255)                                                                                                                 ggAGACGGCTTCATCATGCCCAAGCGCGATGAACGGcgtctccccgatcgggagcggtggcaagggtgttccagacggcctgcgcggtaacgcaggccgtccgtggagagggaaactgtccaaaaggcagcgtga                                                  <  3:65733‑M2/135‑100 (MQ=255)                                                                                                                 ggAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCgc‑gc                                   <  3:110174/149‑1 (MQ=255)                                                                                                                   agaCGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGC‑GCCt                                 >  6:12455/1‑149 (MQ=255)                                                                                                                     aCGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGC‑GCCTgg                               >  1:26296/1‑149 (MQ=255)                                                                                                                       ggCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGC‑GCCTGGtt                             <  8:217209/149‑1 (MQ=255)                                                                                                                          ttCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGC‑GCCTGGTTggg                          >  3:12205/1‑149 (MQ=255)                                                                                                                            catcatGCCCACGCGCGATGAACGCCGTCAACCATTCTGTACTGAATATTTTTGCTCACTACATTCTGTCGTGTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGC‑GCCTGGTTggg                          <  4:93272/147‑1 (MQ=255)                                                                                                                              tcatGCCCAAGCGCGATGAGCGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGC‑GCCTGGTTGGGGTaa                      >  7:231171/1‑149 (MQ=255)                                                                                                                              tcatGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGC‑GCCTGGTTGGGGTaa                      >  2:62450/1‑149 (MQ=255)                                                                                                                                    ccAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAggc                                                   <  4:15135/115‑1 (MQ=255)                                                                                                                                    ccAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGC‑GCCTGGTTGGGGTAATTCCGa                <  3:137546/149‑1 (MQ=255)                                                                                                                                    ccAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGC‑GCCTGGTTGGGGTAATTCCGa                <  2:80026/149‑1 (MQ=255)                                                                                                                                    ccAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGC‑GCCTGGTTGGGGTAATTCCGa                <  1:62450/149‑1 (MQ=255)                                                                                                                                           cgATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGC‑GCCTGGTTGGGGTAATTCCGATTGGCca         <  2:251098/149‑1 (MQ=255)                                                                                                                                              tGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGC‑GCCTGGTTGGGGTAATTCCGATTGGCcagca      <  4:12205/149‑1 (MQ=255)                                                                                                                                                aaCGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGC‑GCCTGGTTGGGGTAATTCCGATTGGCcagcag     >  1:100267/1‑148 (MQ=255)                                                                                                                                                aaCGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGC‑GCCTGGTTGGGGTAATTCCGATTAGcctggacc    >  1:228885/1‑143 (MQ=255)                                                                                                                                                  cGGCTTCAACCATTTTGTAGTTAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGC‑GCCTGGTTGGGGTAATTCCGATTGGCCAGCAGCAc  <  7:110019/149‑1 (MQ=255)                                                                                                                                                   ggCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGCTGCCTGGTTGGGGTAATTCCGATTGGCCAGCAGCAc  <  1:176102/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GCATCGCAACAGGGGCTTTCTCACGCTGCCTTTTGGACAGTTTCCCTCTCCACGGACGGCCTGCGTTACCGCGCAGGCCGTCTGGAACACCCTTGCCACCGCTCCCGATCGGGGAGACGGCTTCATCATGCCCAAGCGCGATGAACGGCGTCAACCATTTTGTAGTGAATATTTTTGCTCACTACATTCTGTCGTTTTGTCCGACAATCAACGCGAGCGTTATAAGCCGGAAAGGATGTCGAAGGCGGCTTGAACCCGC‑GCCTGGTTGGGGTAATTCCGATTGGCCAGCAGCAC  >  NC_002947/3276759‑3277052

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.