New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4052589	39 (0.920)	3 (0.070)	3/250	NT	7.3%	coding (521/678 nt)	PP_3572	hypothetical protein
	?	NC_002947	= 4052630	38 (0.930)					coding (480/678 nt)	PP_3572	hypothetical protein

TGACGTAATCCTGCATCTGCGGGCGATAGGCTTGCCACAGGCCATCGAGCACGCCGATCGGGTCGCTGTCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCATGGCTTCGATCACCTGGGTCGAGGACAGCAGGTTGCCAGCCGCCGCGCATT  >  NC_002947/4052488‑4052775                                                                                                                                               |                                                                                                                                                  tGACGTAATCCTGCATCTGCGGGCGATAGGCTTGCCACAGGCCATCGAGCACGCCGATCGGGTCGCTGTCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCg                                                                                                                                             <  6:181391/149‑1 (MQ=255)      tAATCCTGCATCTGCGGGCGATAGGCTTGCCACAGGCCATCGAGCACGCCGATCGGGTCGCTGTCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTc                                                                                                                                        <  3:152877/149‑1 (MQ=255)        aTCCTGCATCTGCGGGCGATAGGCTTGCCACAGGCCATCGAGCACGCCGATCGGGTCGCTGTCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCGGAGTGCACGGGccc                                                                                                                                              >  5:241762/1‑141 (MQ=255)        aTCCTGCATCTGCGGGCGATAGGCTTGCCACAGGCCATCGAGCACGCCGATCGGGTCGCTGTCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGccc                                                                                                                                              <  6:241762/141‑1 (MQ=255)                 cTGCGGGCGATAGGCTTGCCACAGGCCATCGAGCACGCCGATCGGGTCGCTGTCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTg                                                                                                                             >  8:9910/1‑149 (MQ=255)                          aTAGGCTTGCCACAGGCCATCGAGCACGCCGATCGGGTCGCTGTCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATcgccg                                                                                                                    >  8:80847/1‑149 (MQ=255)                                 gcccgcaGGCCATCGAGCACGCCGATCGGGTCGCTGTCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCa                                                                                                              <  7:253110/143‑1 (MQ=255)                                         gCCATCGAGCACGCCGATCGGGTCGCTGTCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGc                                                                                                       >  8:83564/1‑147 (MQ=255)                                         gCCATCGAGCACGCCGATCGGGTCGCTGTCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGc                                                                                                       >  4:248891/1‑147 (MQ=255)                                          ccATCGAGCACGCCGATCGGGTCGCTGTCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCcag                                                                                                    <  3:248891/149‑1 (MQ=255)                                                aGCACGCCGATCGGGTCGCTGTCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCg                                                                                              >  8:35362/1‑149 (MQ=255)                                                     gCCGATCGGGTCGCTGTCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCgg                                                                                         >  6:123296/1‑149 (MQ=255)                                                          tCGGGTCGCTGTCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAgg                                                                                    <  3:80358/149‑1 (MQ=255)                                                            gggTCGCTGTCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGt                                                                                   <  4:174026/148‑1 (MQ=255)                                                              gTCGCTGTCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGgc                                                                                >  3:152152/1‑149 (MQ=255)                                                                   tGTCGGCCCAATCGACGCGCAGGTCCACCACCGGCCAGGTCCGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCCCGGGCCCGGATAACCCACCCGCAGCCATCGCCGCGTGCATGGCTGACAGCAGGCGGTCGGCCAGGTGgccgccc                                                                           >  7:152773/1‑148 (MQ=255)                                                                     tCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGccgccg                                                                           <  7:9910/147‑1 (MQ=255)                                                                           cAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCa                                                                                                                                    >  6:18130/1‑84 (MQ=255)                                                                           cAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCa                                                                                                                                    <  5:18130/84‑1 (MQ=255)                                                                           cAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTgg                                                                                 >  2:31213/1‑135 (MQ=255)                                                                           cAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTgg                                                                                 <  1:31213/135‑1 (MQ=255)                                                                            aaTCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTc                                                                   >  5:124630/1‑148 (MQ=255)                                                                                gACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCaaaa                                                               <  5:123296/148‑1 (MQ=255)                                                                                     gcAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCCCCCGCTGCCATCGCCGCGTGCATGGCTGCCCGCAGGCGGTCGGCCCGGTGGCCGCCGGCCTGGTCACAAGCCCGc                                                         >  4:182983/1‑149 (MQ=255)                                                                                          tCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCAt                                                    >  2:265056/1‑149 (MQ=255)                                                                                           ccaccaGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGc                                                                                                       >  5:198486/1‑97 (MQ=255)                                                                                           ccaccaGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGc                                                                                                       <  6:198486/97‑1 (MQ=255)                                                                                             accaGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCATGGc                                                 >  8:67543/1‑149 (MQ=255)                                                                                             accaGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCATGGc                                                 >  5:217393/1‑149 (MQ=255)                                                                                             accaGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCATGGc                                                 >  5:59505/1‑149 (MQ=255)                                                                                                aGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGggccgctggtggacctgcgcgtcgattgggccgacagcgacccgatcggcgtgctcgatggcctgtggcaagcctatcgcccgcagatgcaggattacgt                                               <  2:103051‑M2/148‑101 (MQ=255)                                                                                                 gCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCATGGCTTCg                                             <  5:90537/149‑1 (MQ=255)                                                                                                  cGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGggccgctggtggacctgcgcgtcgattgggccgacagcgacccgatcggcgtgctcgatggcctgtggcaagcctatcgcccgcagatgcaggattacgtcac                                            <  3:184936‑M2/149‑104 (MQ=255)                                                                                                    gCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCATGGCTTCGa                                            <  1:142908/147‑1 (MQ=255)                                                                                                    gCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCATGGCTTCGAt                                           >  8:201473/1‑148 (MQ=255)                                                                                                    gCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCAAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCATGGCTTCGa                                            >  2:142908/1‑147 (MQ=255)                                                                                                        ggTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGggccgctggtggacctgcgcgtcgattgggccgacagcgacccgatcggcgtgctcgatggcctgtggcaagcctatcgcccgcagatgcaggattacgtcacccgcgc                                      >  1:103051‑M2/1‑40 (MQ=255)                                                                                                             gCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCATGGCTTCGATCACCTGGGTc                                 <  7:201473/149‑1 (MQ=255)                                                                                                                 gCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCATGGCTTCGATCACCTGGGTCGAg                              <  4:152152/148‑1 (MQ=255)                                                                                                                       aaTCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCATGGCTTCGATCACCTGGGTCGAGGAcagca                       <  7:83564/149‑1 (MQ=255)                                                                                                                             cAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCATGGCTTCGATCACCTGGGTCGAGGACAGCAGGtt                   <  7:67543/147‑1 (MQ=255)                                                                                                                                         gTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCATGGCTTCGATCACCTGGGTCGAGGACAGCAGGTTGCCAGCCGCcgcg      >  6:261335/1‑148 (MQ=255)                                                                                                                                         gTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCATGGCTTCGATCACCTGGGTCGAGGACAGCAGGTTGCCAGCCGCcgcg      >  1:259663/1‑148 (MQ=255)                                                                                                                                         gTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCATGGCTTCGATCACCTGGGTCGAGGACAGCAGGTTGCCAGCCGCCgcgc     <  2:259663/149‑1 (MQ=255)                                                                                                                                            cACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCATGGCTTCGATCACCTGGGTCGAGGACAGCAGGTTGCCAGCCGCCGCGCAtt  >  5:12733/1‑149 (MQ=255)                                                                                                                                            cACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCAGGCCTGTTCAAAAGCCAGCACCATGGCTTCGAACACCTGGGTCGAGGACAGCAGGTTGCCAGCCGCCGCGCAtt  >  5:231527/1‑149 (MQ=255)                                                                                                                                               |                                                                                                                                                  TGACGTAATCCTGCATCTGCGGGCGATAGGCTTGCCACAGGCCATCGAGCACGCCGATCGGGTCGCTGTCGGCCCAATCGACGCGCAGGTCCACCAGCGGCCAGGTCAGCTCGCCAGCAATCTTCAGCGCCGCCGAGTGCACGGGCCCGGCTTCGCCACCCGCTGCCATCGCCGCGTGCATGGCTGCCAGCAGGCGGTCGGCCAGGTGGCCGCCGGCCTGTTCAAAAGCCAGCACCATGGCTTCGATCACCTGGGTCGAGGACAGCAGGTTGCCAGCCGCCGCGCATT  >  NC_002947/4052488‑4052775

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.